RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
ATL3-202ENST00000535789 CDC42EP5Q6NZY7 148 aa20.21■□□□□ 0.83
ATL3-202ENST00000535789 DOCK1Q14185 1865 aa20.2■□□□□ 0.82
ATL3-202ENST00000535789 NFIAQ12857 509 aa20.2■□□□□ 0.82
ATL3-202ENST00000535789 MKRN3Q13064 507 aaKnown RBP20.2■□□□□ 0.82
ATL3-202ENST00000535789 OS9Q13438 667 aaPredicted RBP20.2■□□□□ 0.82
ATL3-202ENST00000535789 ARMC9Q7Z3E5 817 aa20.2■□□□□ 0.82
ATL3-202ENST00000535789 EAF2Q96CJ1 260 aaPredicted RBP20.2■□□□□ 0.82
ATL3-202ENST00000535789 GJA5P36382 358 aa20.19■□□□□ 0.82
ATL3-202ENST00000535789 TBC1D9Q6ZT07 1266 aa20.19■□□□□ 0.82
ATL3-202ENST00000535789 SPATA5Q8NB90 893 aa20.19■□□□□ 0.82
ATL3-202ENST00000535789 ABCF2Q9UG63 623 aa20.19■□□□□ 0.82
ATL3-202ENST00000535789 PDE3AQ14432 1141 aa20.18■□□□□ 0.82
ATL3-202ENST00000535789 SUPT20HL1Q3ZLR7 823 aa20.18■□□□□ 0.82
ATL3-202ENST00000535789 FKBP1CQ5VVH2 108 aa20.18■□□□□ 0.82
ATL3-202ENST00000535789 FAM83AQ86UY5 434 aa20.18■□□□□ 0.82
ATL3-202ENST00000535789 FAM198AQ9UFP1 575 aa20.18■□□□□ 0.82
ATL3-202ENST00000535789 DDX60LQ5H9U9 1706 aaKnown RBP20.18■□□□□ 0.82
ATL3-202ENST00000535789 MECOMQ03112 1051 aa20.17■□□□□ 0.82
ATL3-202ENST00000535789 IFFO2Q5TF58 517 aa20.17■□□□□ 0.82
ATL3-202ENST00000535789 ZGPATQ8N5A5 531 aaKnown RBP20.17■□□□□ 0.82
ATL3-202ENST00000535789 CCDC8Q9H0W5 538 aaPredicted RBP20.17■□□□□ 0.82
ATL3-202ENST00000535789 RNF186Q9NXI6 227 aa20.17■□□□□ 0.82
ATL3-202ENST00000535789 MROH7-TTC4A0A0A0MT08 1334 aa20.17■□□□□ 0.82
ATL3-202ENST00000535789 MYH1P12882 1939 aa20.17■□□□□ 0.82
ATL3-202ENST00000535789 ATRNL1Q5VV63 1379 aa20.17■□□□□ 0.82
ATL3-202ENST00000535789 PPP1R12BO60237 982 aaPredicted RBP20.16■□□□□ 0.82
ATL3-202ENST00000535789 TNNI2P48788 182 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 SPRYD7Q5W111 196 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.16■□□□□ 0.82
ATL3-202ENST00000535789 ZFPM1Q8IX07 1006 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.16■□□□□ 0.82
ATL3-202ENST00000535789 WNK4Q96J92 1243 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 BEGAINQ9BUH8 593 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 SNRKQ9NRH2 765 aa20.16■□□□□ 0.82
ATL3-202ENST00000535789 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
ATL3-202ENST00000535789 RPAP2Q8IXW5 612 aaPredicted RBP20.15■□□□□ 0.82
ATL3-202ENST00000535789 TNS4Q8IZW8 715 aa20.15■□□□□ 0.82
ATL3-202ENST00000535789 NSUN4Q96CB9 384 aaKnown RBP20.15■□□□□ 0.82
ATL3-202ENST00000535789 NAV1Q8NEY1 1877 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 CA12O43570 354 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 CYP2E1P05181 493 aaPredicted RBP20.14■□□□□ 0.81
ATL3-202ENST00000535789 UQCRFS1P1P0C7P4 283 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 TCP10Q12799 353 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 TTC39AQ5SRH9 613 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 FAM163AQ96GL9 167 aaPredicted RBP20.14■□□□□ 0.81
ATL3-202ENST00000535789 IL1RAPL2Q9NP60 686 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 DDX4Q9NQI0 724 aaKnown RBP20.14■□□□□ 0.81
ATL3-202ENST00000535789 USP40Q9NVE5 1235 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 SAGE1Q9NXZ1 904 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 TMOD2Q9NZR1 351 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.14■□□□□ 0.81
ATL3-202ENST00000535789 NDUFB9Q9Y6M9 179 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 HTTP42858 3142 aa20.14■□□□□ 0.81
ATL3-202ENST00000535789 WDHD1O75717 1129 aaPredicted RBP20.13■□□□□ 0.81
ATL3-202ENST00000535789 TRPA1O75762 1119 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 BTDP43251 543 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 IREB2P48200 963 aaKnown RBP20.13■□□□□ 0.81
ATL3-202ENST00000535789 RHBDL3P58872 404 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 VGLL4Q14135 290 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 SH3BP5LQ7L8J4 393 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 ANKRD13AQ8IZ07 590 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 RHPN1Q8TCX5 695 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 FAM151AQ8WW52 585 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 ZNF512BQ96KM6 892 aaPredicted RBP20.13■□□□□ 0.81
ATL3-202ENST00000535789 ZSWIM8A7E2V4 1837 aa20.13■□□□□ 0.81
ATL3-202ENST00000535789 SLURP2P0DP57 97 aa20.12■□□□□ 0.81
ATL3-202ENST00000535789 ZAP70P43403 619 aa20.12■□□□□ 0.81
ATL3-202ENST00000535789 TM4SF4P48230 202 aa20.12■□□□□ 0.81
ATL3-202ENST00000535789 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
ATL3-202ENST00000535789 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
ATL3-202ENST00000535789 ELP3Q9H9T3 547 aa20.12■□□□□ 0.81
ATL3-202ENST00000535789 PIH1D3Q9NQM4 214 aaKnown RBP20.12■□□□□ 0.81
ATL3-202ENST00000535789 GPR75-ASB3A0A0A6YYF3 556 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 UNCXA6NJT0 531 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 RGS3P49796 1198 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 CCDC158Q5M9N0 1113 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 SPTY2D1Q68D10 685 aaPredicted RBP20.11■□□□□ 0.81
ATL3-202ENST00000535789 AACSQ86V21 672 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 ERC1Q8IUD2 1116 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 SLC10A4Q96EP9 437 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 SNCAIPQ9Y6H5 919 aa20.11■□□□□ 0.81
ATL3-202ENST00000535789 APBB1O00213 710 aa20.1■□□□□ 0.81
ATL3-202ENST00000535789 ZBTB48P10074 688 aaPredicted RBP20.1■□□□□ 0.81
ATL3-202ENST00000535789 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
ATL3-202ENST00000535789 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
ATL3-202ENST00000535789 RAI14Q9P0K7 980 aa20.1■□□□□ 0.81
ATL3-202ENST00000535789 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
ATL3-202ENST00000535789 MIGA2Q7L4E1 593 aa20.09■□□□□ 0.81
ATL3-202ENST00000535789 REM2Q8IYK8 340 aaPredicted RBP20.09■□□□□ 0.81
ATL3-202ENST00000535789 OPTNQ96CV9 577 aa20.09■□□□□ 0.81
ATL3-202ENST00000535789 R3HDMLQ9H3Y0 253 aa20.09■□□□□ 0.81
ATL3-202ENST00000535789 ANTXR1Q9H6X2 564 aa20.09■□□□□ 0.81
ATL3-202ENST00000535789 COL2A1P02458 1487 aaPredicted RBP20.09■□□□□ 0.81
ATL3-202ENST00000535789 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
ATL3-202ENST00000535789 INPP5BP32019 993 aa20.08■□□□□ 0.81
ATL3-202ENST00000535789 ZKSCAN4Q969J2 545 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms