RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TEPSINQ96N21 525 aa27.69■■■□□ 2.02
SFSWAP-204ENST00000535399 ECHDC1Q9NTX5 307 aa27.69■■■□□ 2.02
SFSWAP-204ENST00000535399 NF2P35240 595 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 TNNI2P48788 182 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 FKBP1BP68106 108 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 NBPF12Q5TAG4 269 aaPredicted RBP27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 NAA16Q6N069 864 aaPredicted RBP27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 FAM83AQ86UY5 434 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 CDAN1Q8IWY9 1227 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 SMC5Q8IY18 1101 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 DNAJC2Q99543 621 aaKnown RBP27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 HAUS7Q99871 368 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 TMEM39BQ9GZU3 492 aa27.68■■■□□ 2.02
SFSWAP-204ENST00000535399 IDH1O75874 414 aaKnown RBP27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 HUNKP57058 714 aa27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 RHBDL3P58872 404 aa27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 NFIAQ12857 509 aa27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 MOB2Q70IA6 237 aa27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 EDC3Q96F86 508 aaKnown RBP27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 HHIPL1Q96JK4 782 aa27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 SSC5DA1L4H1 1573 aa27.67■■■□□ 2.02
SFSWAP-204ENST00000535399 GOLIM4O00461 696 aa27.66■■■□□ 2.02
SFSWAP-204ENST00000535399 TTF1Q15361 905 aaPredicted RBP27.66■■■□□ 2.02
SFSWAP-204ENST00000535399 SUPT20HL1Q3ZLR7 823 aa27.66■■■□□ 2.02
SFSWAP-204ENST00000535399 OTUD7AQ8TE49 926 aaPredicted RBP27.66■■■□□ 2.02
SFSWAP-204ENST00000535399 FAM198AQ9UFP1 575 aa27.66■■■□□ 2.02
SFSWAP-204ENST00000535399 RFX7Q2KHR2 1363 aa27.65■■■□□ 2.02
SFSWAP-204ENST00000535399 VEGFBP49765 207 aa27.65■■■□□ 2.02
SFSWAP-204ENST00000535399 TSHZ3Q63HK5 1081 aa27.65■■■□□ 2.02
SFSWAP-204ENST00000535399 ADGRA1Q86SQ6 560 aa27.65■■■□□ 2.02
SFSWAP-204ENST00000535399 MYH2Q9UKX2 1941 aa27.65■■■□□ 2.02
SFSWAP-204ENST00000535399 MAP3K12Q12852 859 aa27.64■■■□□ 2.02
SFSWAP-204ENST00000535399 GPATCH3Q96I76 525 aa27.64■■■□□ 2.02
SFSWAP-204ENST00000535399 IDI2Q9BXS1 227 aa27.64■■■□□ 2.02
SFSWAP-204ENST00000535399 PAG1Q9NWQ8 432 aa27.64■■■□□ 2.02
SFSWAP-204ENST00000535399 PAPPA2Q9BXP8 1791 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 UBE2Q2LH0YL09 131 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 WDHD1O75717 1129 aaPredicted RBP27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 CYP7A1P22680 504 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 CYP4F22Q6NT55 531 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 MAGEB6Q8N7X4 407 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 FAM151AQ8WW52 585 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 SALL3Q9BXA9 1300 aa27.63■■■□□ 2.01
SFSWAP-204ENST00000535399 MAP4K4O95819 1239 aaPredicted RBP27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 PPP4CP60510 307 aa27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 TCP10Q12799 353 aa27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 PRKG1Q13976 671 aa27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 TTLL12Q14166 644 aaPredicted RBP27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 JMYQ8N9B5 988 aa27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 CAPNS2Q96L46 248 aa27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 ZBTB47Q9UFB7 747 aaPredicted RBP27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 FZD1Q9UP38 647 aa27.62■■■□□ 2.01
SFSWAP-204ENST00000535399 RPAP1Q9BWH6 1393 aaPredicted RBP27.61■■■□□ 2.01
SFSWAP-204ENST00000535399 TMED8Q6PL24 325 aaPredicted RBP27.61■■■□□ 2.01
SFSWAP-204ENST00000535399 ARMC9Q7Z3E5 817 aa27.61■■■□□ 2.01
SFSWAP-204ENST00000535399 ZFPM1Q8IX07 1006 aa27.61■■■□□ 2.01
SFSWAP-204ENST00000535399 DDX4Q9NQI0 724 aaKnown RBP27.61■■■□□ 2.01
SFSWAP-204ENST00000535399 TTC41PQ6P2S7 1318 aa27.61■■■□□ 2.01
SFSWAP-204ENST00000535399 RGS3P49796 1198 aa27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 MAP3K11Q16584 847 aa27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 RGMBQ6NW40 437 aa27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 PAXIP1Q6ZW49 1069 aaPredicted RBP27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 AATFQ9NY61 560 aaKnown RBP eCLIP27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 ANGEL1Q9UNK9 670 aaKnown RBP27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 WDR33Q9C0J8 1336 aaKnown RBP27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 MAST2Q6P0Q8 1798 aa27.6■■■□□ 2.01
SFSWAP-204ENST00000535399 PPP1R12BO60237 982 aaPredicted RBP27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 ENTPD3O75355 529 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 BAG3O95817 575 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 PDE6AP16499 860 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 MX1P20591 662 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 ECE1P42892 770 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 LDLRAD1Q5T700 205 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 B4GALNT3Q6L9W6 998 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 PI4K2BQ8TCG2 481 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 SH3RF3Q8TEJ3 882 aaPredicted RBP27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 NOL10Q9BSC4 688 aaKnown RBP27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 LNPKQ9C0E8 428 aa27.59■■■□□ 2.01
SFSWAP-204ENST00000535399 USP2O75604 605 aaPredicted RBP27.58■■■□□ 2.01
SFSWAP-204ENST00000535399 SLC9C2Q5TAH2 1124 aa27.58■■■□□ 2.01
SFSWAP-204ENST00000535399 MYO5AQ9Y4I1 1855 aaKnown RBP27.57■■■□□ 2
SFSWAP-204ENST00000535399 NPM3O75607 178 aaKnown RBP27.57■■■□□ 2
SFSWAP-204ENST00000535399 NUCB1Q02818 461 aa27.57■■■□□ 2
SFSWAP-204ENST00000535399 TEX11Q8IYF3 940 aa27.57■■■□□ 2
SFSWAP-204ENST00000535399 DOCK2Q92608 1830 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 TCRBV5S4A2TA0A5A2 114 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 ERC2O15083 957 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 PLCG2P16885 1265 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 ZNF157P51786 506 aaPredicted RBP27.56■■■□□ 2
SFSWAP-204ENST00000535399 DYNLL1P63167 89 aaKnown RBP27.56■■■□□ 2
SFSWAP-204ENST00000535399 GRM1Q13255 1194 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 PICALMQ13492 652 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 SH3BP5LQ7L8J4 393 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 CHD1LQ86WJ1 897 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 STAP2Q9UGK3 403 aa27.56■■■□□ 2
SFSWAP-204ENST00000535399 FAM155AB1AL88 458 aaPredicted RBP27.55■■■□□ 2
SFSWAP-204ENST00000535399 GLRX3O76003 335 aaKnown RBP27.55■■■□□ 2
SFSWAP-204ENST00000535399 MIGA1Q8NAN2 632 aa27.55■■■□□ 2
SFSWAP-204ENST00000535399 ZNF532Q9HCE3 1301 aa27.55■■■□□ 2
SFSWAP-204ENST00000535399 SLC10A3P09131 477 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms