RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 TFCP2Q12800 502 aa23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 DIXDC1Q155Q3 683 aa23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 ZKSCAN2Q63HK3 967 aa23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 CSADQ9Y600 493 aa23.34■■□□□ 1.33
NDUFS3-213ENST00000534716 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
NDUFS3-213ENST00000534716 HPS5Q9UPZ3 1129 aa23.33■■□□□ 1.33
NDUFS3-213ENST00000534716 MYH13Q9UKX3 1938 aa23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 RASGRF1Q13972 1273 aa23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 MVPQ14764 893 aaKnown RBP23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 DCAF15Q66K64 600 aa23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 CLUAP1Q96AJ1 413 aa23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 XAGE2Q96GT9 111 aa23.32■■□□□ 1.32
NDUFS3-213ENST00000534716 SPDYE5A6NIY4 337 aa23.31■■□□□ 1.32
NDUFS3-213ENST00000534716 GTF2A2P52657 109 aa23.31■■□□□ 1.32
NDUFS3-213ENST00000534716 TMEM57Q8N5G2 664 aa23.31■■□□□ 1.32
NDUFS3-213ENST00000534716 CNKSR2Q8WXI2 1034 aa23.31■■□□□ 1.32
NDUFS3-213ENST00000534716 FAM163AQ96GL9 167 aaPredicted RBP23.31■■□□□ 1.32
NDUFS3-213ENST00000534716 SNCAIPQ9Y6H5 919 aa23.31■■□□□ 1.32
NDUFS3-213ENST00000534716 PNMA6EA0A0J9YXQ4 647 aa23.3■■□□□ 1.32
NDUFS3-213ENST00000534716 FBXO46Q6PJ61 603 aaPredicted RBP23.3■■□□□ 1.32
NDUFS3-213ENST00000534716 ERO1BQ86YB8 467 aa23.3■■□□□ 1.32
NDUFS3-213ENST00000534716 WRNIP1Q96S55 665 aa23.3■■□□□ 1.32
NDUFS3-213ENST00000534716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.3■■□□□ 1.32
NDUFS3-213ENST00000534716 GAKO14976 1311 aa23.3■■□□□ 1.32
NDUFS3-213ENST00000534716 CRHR2Q13324 411 aa23.29■■□□□ 1.32
NDUFS3-213ENST00000534716 BRI3BPQ8WY22 251 aa23.29■■□□□ 1.32
NDUFS3-213ENST00000534716 USP40Q9NVE5 1235 aa23.29■■□□□ 1.32
NDUFS3-213ENST00000534716 FAM198AQ9UFP1 575 aa23.29■■□□□ 1.32
NDUFS3-213ENST00000534716 ZNF112Q9UJU3 913 aa23.29■■□□□ 1.32
NDUFS3-213ENST00000534716 NFIAQ12857 509 aa23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 SPTY2D1Q68D10 685 aaPredicted RBP23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 SLF2Q8IX21 1173 aa23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 ZKSCAN4Q969J2 545 aaPredicted RBP23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 OTUD5Q96G74 571 aa23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 IDI2Q9BXS1 227 aa23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 ZNF341Q9BYN7 854 aa23.28■■□□□ 1.32
NDUFS3-213ENST00000534716 POLA2Q14181 598 aa23.27■■□□□ 1.32
NDUFS3-213ENST00000534716 HTTP42858 3142 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 CCL15-CCL14A0A0B4J2E2 113 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 G3BP1Q13283 466 aaKnown RBP eCLIP23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 PPIL2Q13356 520 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 CCL15Q16663 113 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 SSH3Q8TE77 659 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 ERO1AQ96HE7 468 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 ZCCHC17Q9NP64 241 aaKnown RBP23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 ZBED9Q6R2W3 1325 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 RFX7Q2KHR2 1363 aa23.26■■□□□ 1.31
NDUFS3-213ENST00000534716 TNRC18O15417 2968 aaPredicted RBP23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 ENTPD3O75355 529 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 CETPP11597 493 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 ARID4AP29374 1257 aaPredicted RBP23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 PPATQ06203 517 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 TCP10Q12799 353 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 DZIP1Q86YF9 867 aaKnown RBP23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 NEUROD6Q96NK8 337 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 GPR108Q9NPR9 543 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 ABCF2Q9UG63 623 aa23.25■■□□□ 1.31
NDUFS3-213ENST00000534716 ATP8B2P98198 1209 aa23.24■■□□□ 1.31
NDUFS3-213ENST00000534716 SNAPC2Q13487 334 aa23.24■■□□□ 1.31
NDUFS3-213ENST00000534716 OTOP1Q7RTM1 612 aa23.24■■□□□ 1.31
NDUFS3-213ENST00000534716 HMG20BQ9P0W2 317 aa23.24■■□□□ 1.31
NDUFS3-213ENST00000534716 ATRNL1Q5VV63 1379 aa23.24■■□□□ 1.31
NDUFS3-213ENST00000534716 IRF6O14896 467 aa23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 ZBTB7BO15156 539 aaPredicted RBP23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 SOX10P56693 466 aa23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 SP3Q02447 781 aa23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 NOL9Q5SY16 702 aaKnown RBP23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 ZFYVE28Q9HCC9 887 aa23.23■■□□□ 1.31
NDUFS3-213ENST00000534716 INPP5BP32019 993 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 MECOMQ03112 1051 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 GORABQ5T7V8 394 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 ERICH6Q7L0X2 663 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 FTSJ3Q8IY81 847 aaKnown RBP23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 FAM43AQ8N2R8 423 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 TRIM17Q9Y577 477 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 MROH7-TTC4A0A0A0MT08 1334 aa23.22■■□□□ 1.31
NDUFS3-213ENST00000534716 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
NDUFS3-213ENST00000534716 MAP4K4O95819 1239 aaPredicted RBP23.21■■□□□ 1.31
NDUFS3-213ENST00000534716 RGS3P49796 1198 aa23.21■■□□□ 1.31
NDUFS3-213ENST00000534716 TAF1CQ15572 869 aaPredicted RBP23.21■■□□□ 1.31
NDUFS3-213ENST00000534716 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 WDHD1O75717 1129 aaPredicted RBP23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 UQCRFS1P1P0C7P4 283 aa23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 RLBP1P12271 317 aa23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 BTDP43251 543 aa23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 CD99L2Q8TCZ2 262 aa23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 KCNH4Q9UQ05 1017 aa23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 NOP58Q9Y2X3 529 aaKnown RBP23.2■■□□□ 1.3
NDUFS3-213ENST00000534716 PHF20L1A8MW92 1017 aa23.19■■□□□ 1.3
NDUFS3-213ENST00000534716 BTBD19C9JJ37 291 aa23.19■■□□□ 1.3
NDUFS3-213ENST00000534716 GSTO1P78417 241 aa23.19■■□□□ 1.3
NDUFS3-213ENST00000534716 SH3BP5LQ7L8J4 393 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms