RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 DLK2Q6UY11 383 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 ERO1BQ86YB8 467 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 MCOLN1Q9GZU1 580 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 GINM1Q9NU53 330 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 CASP8AP2Q9UKL3 1982 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 TRPA1O75762 1119 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 BCAR3O75815 825 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 PPIL2Q13356 520 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 ERO1AQ96HE7 468 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 DAGLAQ9Y4D2 1042 aa12.81□□□□□ -0.36
CSDE1-217ENST00000534699 GPR25O00155 361 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 ZBTB7BO15156 539 aaPredicted RBP12.8□□□□□ -0.36
CSDE1-217ENST00000534699 GNRH1P01148 92 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 PLCG2P16885 1265 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 PPATQ06203 517 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 DGKZQ13574 1117 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
CSDE1-217ENST00000534699 TBC1D12O60347 775 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 PHKA1P46020 1223 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 SIL1Q9H173 461 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 FOCADQ5VW36 1801 aa12.8□□□□□ -0.36
CSDE1-217ENST00000534699 RBBP6Q7Z6E9 1792 aaKnown RBP12.79□□□□□ -0.36
CSDE1-217ENST00000534699 CETPP11597 493 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 TFCP2Q12800 502 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
CSDE1-217ENST00000534699 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 PRMT2P55345 433 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
CSDE1-217ENST00000534699 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
CSDE1-217ENST00000534699 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
CSDE1-217ENST00000534699 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.78□□□□□ -0.36
CSDE1-217ENST00000534699 DZIP1Q86YF9 867 aaKnown RBP12.78□□□□□ -0.36
CSDE1-217ENST00000534699 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
CSDE1-217ENST00000534699 SLC45A1Q9Y2W3 748 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 DOCK1Q14185 1865 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 HMMRO75330 724 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
CSDE1-217ENST00000534699 CXCL11O14625 94 aa12.77□□□□□ -0.36
CSDE1-217ENST00000534699 RASGRF1Q13972 1273 aa12.77□□□□□ -0.36
CSDE1-217ENST00000534699 GRIK5Q16478 980 aa12.77□□□□□ -0.36
CSDE1-217ENST00000534699 SPATA5Q8NB90 893 aa12.77□□□□□ -0.36
CSDE1-217ENST00000534699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.77□□□□□ -0.36
CSDE1-217ENST00000534699 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.36
CSDE1-217ENST00000534699 PCDHAC2Q9Y5I4 1007 aa12.77□□□□□ -0.36
CSDE1-217ENST00000534699 SNAPC2Q13487 334 aa12.77□□□□□ -0.37
CSDE1-217ENST00000534699 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
CSDE1-217ENST00000534699 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
CSDE1-217ENST00000534699 MS4A4AQ96JQ5 239 aa12.77□□□□□ -0.37
CSDE1-217ENST00000534699 NOL10Q9BSC4 688 aaKnown RBP12.77□□□□□ -0.37
CSDE1-217ENST00000534699 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.37
CSDE1-217ENST00000534699 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
CSDE1-217ENST00000534699 JAG2Q9Y219 1238 aa12.77□□□□□ -0.37
CSDE1-217ENST00000534699 PPP4CP60510 307 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 BAG3O95817 575 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 VGLL4Q14135 290 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 ANKRD23Q86SG2 305 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 HMG20BQ9P0W2 317 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 SNCAIPQ9Y6H5 919 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 AOX1Q06278 1338 aa12.76□□□□□ -0.37
CSDE1-217ENST00000534699 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 PRDX5P30044 214 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 TIMM10P62072 90 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 ZNF296Q8WUU4 475 aaPredicted RBP12.75□□□□□ -0.37
CSDE1-217ENST00000534699 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
CSDE1-217ENST00000534699 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
CSDE1-217ENST00000534699 ADORA1P30542 326 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 ELP3Q9H9T3 547 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
CSDE1-217ENST00000534699 CTNND1O60716 968 aaKnown RBP12.74□□□□□ -0.37
CSDE1-217ENST00000534699 GJA5P36382 358 aa12.74□□□□□ -0.37
CSDE1-217ENST00000534699 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
CSDE1-217ENST00000534699 CEP85Q6P2H3 762 aa12.74□□□□□ -0.37
CSDE1-217ENST00000534699 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
CSDE1-217ENST00000534699 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
CSDE1-217ENST00000534699 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
CSDE1-217ENST00000534699 PRKG1Q13976 671 aa12.74□□□□□ -0.37
CSDE1-217ENST00000534699 FASTKD5Q7L8L6 764 aaKnown RBP12.74□□□□□ -0.37
CSDE1-217ENST00000534699 NSUN4Q96CB9 384 aaKnown RBP12.74□□□□□ -0.37
CSDE1-217ENST00000534699 MECOMQ03112 1051 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms