RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CAMSAP1Q5T5Y3 1602 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 SEC62Q99442 399 aaKnown RBP19.57■□□□□ 0.72
PHRF1-206ENST00000534320 ZSWIM6Q9HCJ5 1215 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-206ENST00000534320 ZNF445P59923 1031 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 RILPL1Q5EBL4 403 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 EYA3Q99504 573 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 PNPLA6Q8IY17 1366 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 ANO1Q5XXA6 986 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 LEO1Q8WVC0 666 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-206ENST00000534320 MCM7P33993 719 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 TRAF1Q13077 416 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 ELP1O95163 1332 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
PHRF1-206ENST00000534320 GADD45BO75293 160 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-206ENST00000534320 CTDSPL2Q05D32 466 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 TEX11Q8IYF3 940 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 ERMNQ8TAM6 284 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 CDC42BPGQ6DT37 1551 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 PAXBP1Q9Y5B6 917 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 LSG1Q9H089 658 aaKnown RBP19.56■□□□□ 0.72
PHRF1-206ENST00000534320 PRDM1O75626 825 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 GNA11P29992 359 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 GTF3C6Q969F1 213 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 ASAP1Q9ULH1 1129 aa19.56■□□□□ 0.72
PHRF1-206ENST00000534320 PSMA7O14818 248 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 TTC6Q86TZ1 520 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 MNAT1P51948 309 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 TCERG1LQ5VWI1 586 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 DBNLQ9UJU6 430 aaKnown RBP19.55■□□□□ 0.72
PHRF1-206ENST00000534320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.55■□□□□ 0.721e-7■■■■□ 21.8
PHRF1-206ENST00000534320 POLR3GO15318 223 aaPredicted RBP19.55■□□□□ 0.72
PHRF1-206ENST00000534320 ASIC1P78348 528 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 WDR66Q8TBY9 1149 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 IBSPP21815 317 aaPredicted RBP19.55■□□□□ 0.72
PHRF1-206ENST00000534320 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
PHRF1-206ENST00000534320 SAP30BPQ9UHR5 308 aaKnown RBP19.55■□□□□ 0.72
PHRF1-206ENST00000534320 CCDC24Q8N4L8 307 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 AATFQ9NY61 560 aaKnown RBP eCLIP19.54■□□□□ 0.724e-7■■■■■ 34.9
PHRF1-206ENST00000534320 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
PHRF1-206ENST00000534320 GNG11P61952 73 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 MAP2K1Q02750 393 aaPredicted RBP19.54■□□□□ 0.72
PHRF1-206ENST00000534320 GGA1Q9UJY5 639 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 BMS1Q14692 1282 aaKnown RBP19.54■□□□□ 0.72
PHRF1-206ENST00000534320 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 STXBP4Q6ZWJ1 553 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 MYL10Q9BUA6 226 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 RGS12O14924 1447 aa19.54■□□□□ 0.72
PHRF1-206ENST00000534320 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 HSPD1P10809 573 aaKnown RBP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 TRIM21P19474 475 aaKnown RBP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 TBCAO75347 108 aaKnown RBP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
PHRF1-206ENST00000534320 IQUBQ8NA54 791 aa19.53■□□□□ 0.72
PHRF1-206ENST00000534320 TPCN1Q9ULQ1 816 aa19.53■□□□□ 0.72
PHRF1-206ENST00000534320 DIS3L2Q8IYB7 885 aaKnown RBP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 V9GY48 417 aaPredicted RBP19.53■□□□□ 0.72
PHRF1-206ENST00000534320 TNNI2P48788 182 aa19.53■□□□□ 0.72
PHRF1-206ENST00000534320 GOLGA6L10A0A0M3HER8 536 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 PTGS1P23219 599 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 MAP4K1Q92918 833 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 SAMM50Q9Y512 469 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 ZNF174Q15697 407 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 PPP4R3AQ6IN85 833 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 PHKBQ93100 1093 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 GPR108Q9NPR9 543 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 DIP2CQ9Y2E4 1556 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 GIGYF2Q6Y7W6 1299 aaKnown RBP19.52■□□□□ 0.72
PHRF1-206ENST00000534320 IFNKQ9P0W0 207 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 USP21Q9UK80 565 aa19.52■□□□□ 0.72
PHRF1-206ENST00000534320 CIAO1O76071 339 aa19.52■□□□□ 0.71
PHRF1-206ENST00000534320 RPS8P62241 208 aaKnown RBP19.52■□□□□ 0.71
PHRF1-206ENST00000534320 PUS3Q9BZE2 481 aaKnown RBP19.52■□□□□ 0.71
PHRF1-206ENST00000534320 PKP1Q13835 747 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 TRMT1LQ7Z2T5 733 aaKnown RBP19.51■□□□□ 0.71
PHRF1-206ENST00000534320 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 GTPBP4Q9BZE4 634 aaKnown RBP19.51■□□□□ 0.71
PHRF1-206ENST00000534320 AKNAD1Q5T1N1 836 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 RNF187Q5TA31 235 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-206ENST00000534320 SMARCC2Q8TAQ2 1214 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 ZNF274Q96GC6 653 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-206ENST00000534320 GREM2Q9H772 168 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 VWA3AA6NCI4 1184 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 POLA2Q14181 598 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 KRT79Q5XKE5 535 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 KRT40Q6A162 431 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 POTEJP0CG39 1038 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 CETN1Q12798 172 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 PPP2R5BQ15173 497 aa19.51■□□□□ 0.71
PHRF1-206ENST00000534320 PAFAH1B1P43034 410 aa19.5■□□□□ 0.71
PHRF1-206ENST00000534320 PDE6AP16499 860 aa19.5■□□□□ 0.71
PHRF1-206ENST00000534320 STX17P56962 302 aa19.5■□□□□ 0.71
PHRF1-206ENST00000534320 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
PHRF1-206ENST00000534320 TMEM63CQ9P1W3 806 aa19.5■□□□□ 0.71
PHRF1-206ENST00000534320 KCNH3Q9ULD8 1083 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms