RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
SF3B2-215ENST00000534307 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-215ENST00000534307 ZBTB48P10074 688 aaPredicted RBP17.38■□□□□ 0.37
SF3B2-215ENST00000534307 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
SF3B2-215ENST00000534307 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
SF3B2-215ENST00000534307 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
SF3B2-215ENST00000534307 SLC10A4Q96EP9 437 aa17.38■□□□□ 0.37
SF3B2-215ENST00000534307 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
SF3B2-215ENST00000534307 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
SF3B2-215ENST00000534307 GJA5P36382 358 aa17.37■□□□□ 0.37
SF3B2-215ENST00000534307 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.37
SF3B2-215ENST00000534307 HABP4Q5JVS0 413 aaKnown RBP17.37■□□□□ 0.37
SF3B2-215ENST00000534307 ANKRD13AQ8IZ07 590 aa17.37■□□□□ 0.37
SF3B2-215ENST00000534307 ZGPATQ8N5A5 531 aaKnown RBP17.37■□□□□ 0.37
SF3B2-215ENST00000534307 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
SF3B2-215ENST00000534307 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
SF3B2-215ENST00000534307 MYH2Q9UKX2 1941 aa17.37■□□□□ 0.37
SF3B2-215ENST00000534307 SREBF2Q12772 1141 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.36■□□□□ 0.37
SF3B2-215ENST00000534307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.36■□□□□ 0.37
SF3B2-215ENST00000534307 CFHR5Q9BXR6 569 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 TMOD2Q9NZR1 351 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 RANBP2P49792 3224 aaKnown RBP17.36■□□□□ 0.37
SF3B2-215ENST00000534307 GAKO14976 1311 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 RFX7Q2KHR2 1363 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 TRIOBPQ9H2D6 2365 aa17.36■□□□□ 0.37
SF3B2-215ENST00000534307 MANSC4A6NHS7 340 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-215ENST00000534307 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-215ENST00000534307 FBXO46Q6PJ61 603 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-215ENST00000534307 ZNF384Q8TF68 577 aa17.35■□□□□ 0.37
SF3B2-215ENST00000534307 FAM163AQ96GL9 167 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-215ENST00000534307 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
SF3B2-215ENST00000534307 HMG20BQ9P0W2 317 aa17.35■□□□□ 0.37
SF3B2-215ENST00000534307 GPR25O00155 361 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 NFIAQ12857 509 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 VGLL4Q14135 290 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 NOM1Q5C9Z4 860 aaKnown RBP17.34■□□□□ 0.37
SF3B2-215ENST00000534307 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 FAM151AQ8WW52 585 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 FAM198AQ9UFP1 575 aa17.34■□□□□ 0.37
SF3B2-215ENST00000534307 INHBEP58166 350 aa17.33■□□□□ 0.36
SF3B2-215ENST00000534307 TNNI3KQ59H18 835 aa17.33■□□□□ 0.36
SF3B2-215ENST00000534307 SPATA5Q8NB90 893 aa17.33■□□□□ 0.36
SF3B2-215ENST00000534307 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
SF3B2-215ENST00000534307 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.36
SF3B2-215ENST00000534307 TESPA1A2RU30 521 aaPredicted RBP17.32■□□□□ 0.36
SF3B2-215ENST00000534307 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
SF3B2-215ENST00000534307 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
SF3B2-215ENST00000534307 MCAMP43121 646 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 SPTY2D1Q68D10 685 aaPredicted RBP17.32■□□□□ 0.36
SF3B2-215ENST00000534307 DZIP1Q86YF9 867 aaKnown RBP17.32■□□□□ 0.36
SF3B2-215ENST00000534307 IFNL1Q8IU54 200 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 OPTNQ96CV9 577 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 R3HDMLQ9H3Y0 253 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 USP40Q9NVE5 1235 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
SF3B2-215ENST00000534307 ATRNL1Q5VV63 1379 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 MS4A1P11836 297 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 MECOMQ03112 1051 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
SF3B2-215ENST00000534307 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 ALDH1A1P00352 501 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 TCP10Q12799 353 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 ZFPM1Q8IX07 1006 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 PTPN18Q99952 460 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
SF3B2-215ENST00000534307 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
SF3B2-215ENST00000534307 GPR75-ASB3A0A0A6YYF3 556 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 SPDYE5A6NIY4 337 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
SF3B2-215ENST00000534307 OS9Q13438 667 aaPredicted RBP17.29■□□□□ 0.36
SF3B2-215ENST00000534307 DCAF15Q66K64 600 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 SLF2Q8IX21 1173 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
SF3B2-215ENST00000534307 NSUN4Q96CB9 384 aaKnown RBP17.29■□□□□ 0.36
SF3B2-215ENST00000534307 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
SF3B2-215ENST00000534307 WRNIP1Q96S55 665 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 ZNF112Q9UJU3 913 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
SF3B2-215ENST00000534307 CSADQ9Y600 493 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 MAST2Q6P0Q8 1798 aa17.29■□□□□ 0.36
SF3B2-215ENST00000534307 COL6A3P12111 3177 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 A0A0C4DFX4 3053 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 POTEFA5A3E0 1075 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 ENTPD3O75355 529 aa17.28■□□□□ 0.36
SF3B2-215ENST00000534307 BTDP43251 543 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms