RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 MYD88Q99836 296 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 ISCA1Q9BUE6 129 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 DNMT3LQ9UJW3 386 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 COL15A1P39059 1388 aa7.7□□□□□ -1.18
CMTM1-220ENST00000534143 CAMTA2O94983 1202 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 NEXNQ0ZGT2 675 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 CWF19L2Q2TBE0 894 aaKnown RBP7.69□□□□□ -1.18
CMTM1-220ENST00000534143 SMIM5Q71RC9 77 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
CMTM1-220ENST00000534143 ZNF395Q9H8N7 513 aaPredicted RBP7.69□□□□□ -1.18
CMTM1-220ENST00000534143 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 CYLDQ9NQC7 956 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 RTCBQ9Y3I0 505 aaKnown RBP7.69□□□□□ -1.18
CMTM1-220ENST00000534143 UTYO14607 1347 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 C4AP0C0L4 1744 aa7.69□□□□□ -1.18
CMTM1-220ENST00000534143 ATP5J2-PTCD1G3V325 749 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 H3BM21 787 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 GNAI3P08754 354 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 PTGIRP43119 386 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 VEGFBP49765 207 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 GCKRQ14397 625 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.68□□□□□ -1.18
CMTM1-220ENST00000534143 HSP90AB3PQ58FF7 597 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 CLEC4GQ6UXB4 293 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 NPM2Q86SE8 214 aaKnown RBP7.68□□□□□ -1.18
CMTM1-220ENST00000534143 ZNF34Q8IZ26 560 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 CCDC191Q8NCU4 936 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 NARFQ9UHQ1 456 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 TUBGCP6Q96RT7 1819 aa7.68□□□□□ -1.18
CMTM1-220ENST00000534143 SCN7AQ01118 1682 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 FIGNL2A6NMB9 653 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 H7C1W4 665 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 GRM8O00222 908 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 WIPF1O43516 503 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 NBPF7P0C2Y1 421 aaPredicted RBP7.67□□□□□ -1.18
CMTM1-220ENST00000534143 SSFA2P28290 1259 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 CASP7P55210 303 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 ERVK-9P63128 1117 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 ZNF827Q17R98 1081 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 TRAPPC3LQ5T215 181 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 CC2D2BQ6DHV5 1058 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 ARXQ96QS3 562 aa7.67□□□□□ -1.18
CMTM1-220ENST00000534143 INSM2Q96T92 566 aaPredicted RBP7.67□□□□□ -1.18
CMTM1-220ENST00000534143 QSER1Q2KHR3 1735 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 IGHDP01880 384 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 GNAI2P04899 355 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 UBTFL1P0CB47 393 aaPredicted RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 ABL2P42684 1182 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 CTSOP43234 321 aaPredicted RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 USPL1Q5W0Q7 1092 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 NLRP10Q86W26 655 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 SIRT2Q8IXJ6 389 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 RPAP2Q8IXW5 612 aaPredicted RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 ANKRD44Q8N8A2 993 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 IRF7Q92985 503 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 KAZALD1Q96I82 304 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 CCDC136Q96JN2 1154 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
CMTM1-220ENST00000534143 CWC25Q9NXE8 425 aaPredicted RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 C9orf78Q9NZ63 289 aaPredicted RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 SRP68Q9UHB9 627 aaKnown RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 USP42Q9H9J4 1324 aaKnown RBP7.66□□□□□ -1.18
CMTM1-220ENST00000534143 PCCAP05165 728 aaPredicted RBP7.65□□□□□ -1.18
CMTM1-220ENST00000534143 GPTP24298 496 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 RFC4P35249 363 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 ATP8B2P98198 1209 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 HDAC1Q13547 482 aaPredicted RBP7.65□□□□□ -1.18
CMTM1-220ENST00000534143 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.18
CMTM1-220ENST00000534143 TMEM132AQ24JP5 1023 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 WASHC4Q2M389 1173 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 PARP10Q53GL7 1025 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 CEP85Q6P2H3 762 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 UBN2Q6ZU65 1347 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 KDM2BQ8NHM5 1336 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 JARID2Q92833 1246 aaPredicted RBP7.65□□□□□ -1.18
CMTM1-220ENST00000534143 SUCLG2Q96I99 432 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 POLMQ9NP87 494 aaPredicted RBP7.65□□□□□ -1.18
CMTM1-220ENST00000534143 HDAC5Q9UQL6 1122 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 ZNF652Q9Y2D9 606 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 PCDHB11Q9Y5F2 797 aa7.65□□□□□ -1.18
CMTM1-220ENST00000534143 LRRFIP2Q9Y608 721 aaKnown RBP7.65□□□□□ -1.18
CMTM1-220ENST00000534143 COL24A1Q17RW2 1714 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 PNPLA7Q6ZV29 1317 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 CDHR2Q9BYE9 1310 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 GYS1P13807 737 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 MTX1Q13505 466 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 SLC15A2Q16348 729 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 EPHA10Q5JZY3 1008 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 SUSD4Q5VX71 490 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 TBC1D9BQ66K14 1250 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 UBE3BQ7Z3V4 1068 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 COL23A1Q86Y22 540 aaPredicted RBP7.64□□□□□ -1.19
CMTM1-220ENST00000534143 ZBTB38Q8NAP3 1195 aaPredicted RBP7.64□□□□□ -1.19
CMTM1-220ENST00000534143 FLAD1Q8NFF5 587 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 RNF217Q8TC41 542 aa7.64□□□□□ -1.19
CMTM1-220ENST00000534143 PLA2G12BQ9BX93 195 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms