RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
CMTM1-219ENST00000533953 TEPSINQ96N21 525 aa16.35■□□□□ 0.21
CMTM1-219ENST00000533953 GAKO14976 1311 aa16.35■□□□□ 0.21
CMTM1-219ENST00000533953 GOLIM4O00461 696 aa16.34■□□□□ 0.21
CMTM1-219ENST00000533953 AOC2O75106 756 aa16.34■□□□□ 0.21
CMTM1-219ENST00000533953 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
CMTM1-219ENST00000533953 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
CMTM1-219ENST00000533953 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
CMTM1-219ENST00000533953 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
CMTM1-219ENST00000533953 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
CMTM1-219ENST00000533953 FAM198AQ9UFP1 575 aa16.34■□□□□ 0.21
CMTM1-219ENST00000533953 MROH7-TTC4A0A0A0MT08 1334 aa16.34■□□□□ 0.21
CMTM1-219ENST00000533953 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
CMTM1-219ENST00000533953 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
CMTM1-219ENST00000533953 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.2
CMTM1-219ENST00000533953 NAA16Q6N069 864 aaPredicted RBP16.33■□□□□ 0.2
CMTM1-219ENST00000533953 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.2
CMTM1-219ENST00000533953 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
CMTM1-219ENST00000533953 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.2
CMTM1-219ENST00000533953 SSC5DA1L4H1 1573 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 CHGBP05060 677 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 ATP5JP18859 108 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 CYP7A1P22680 504 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 NF2P35240 595 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 RHBDL3P58872 404 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
CMTM1-219ENST00000533953 TNFAIP1Q13829 316 aa16.32■□□□□ 0.2
CMTM1-219ENST00000533953 DDX4Q9NQI0 724 aaKnown RBP16.32■□□□□ 0.2
CMTM1-219ENST00000533953 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 USP2O75604 605 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 LDHCP07864 332 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 TNNI2P48788 182 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 RGS3P49796 1198 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 GSTO1P78417 241 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 PICALMQ13492 652 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 RGMBQ6NW40 437 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 JMYQ8N9B5 988 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 MIGA1Q8NAN2 632 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 CLMNQ96JQ2 1002 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
CMTM1-219ENST00000533953 PPP2R3BQ9Y5P8 575 aa16.31■□□□□ 0.2
CMTM1-219ENST00000533953 AKAP11Q9UKA4 1901 aa16.3■□□□□ 0.2
CMTM1-219ENST00000533953 MKRN3Q13064 507 aaKnown RBP16.3■□□□□ 0.2
CMTM1-219ENST00000533953 MIGA2Q7L4E1 593 aa16.3■□□□□ 0.2
CMTM1-219ENST00000533953 SH3BP5LQ7L8J4 393 aa16.3■□□□□ 0.2
CMTM1-219ENST00000533953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.3■□□□□ 0.2
CMTM1-219ENST00000533953 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
CMTM1-219ENST00000533953 HAUS7Q99871 368 aa16.3■□□□□ 0.2
CMTM1-219ENST00000533953 TRPM7Q96QT4 1865 aa16.3■□□□□ 0.2
CMTM1-219ENST00000533953 FAM155AB1AL88 458 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-219ENST00000533953 AAMPQ13685 434 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 FKBP1CQ5VVH2 108 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 ARMC9Q7Z3E5 817 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
CMTM1-219ENST00000533953 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
CMTM1-219ENST00000533953 FKBP1BP68106 108 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 MAP3K12Q12852 859 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 LDLRAD1Q5T700 205 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 SMC5Q8IY18 1101 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 TEX11Q8IYF3 940 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 HHIPL1Q96JK4 782 aa16.28■□□□□ 0.2
CMTM1-219ENST00000533953 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.2
CMTM1-219ENST00000533953 PDE6AP16499 860 aa16.27■□□□□ 0.2
CMTM1-219ENST00000533953 ECE1P42892 770 aa16.27■□□□□ 0.2
CMTM1-219ENST00000533953 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
CMTM1-219ENST00000533953 IDI2Q9BXS1 227 aa16.27■□□□□ 0.2
CMTM1-219ENST00000533953 ZNF532Q9HCE3 1301 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 PPP4CP60510 307 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
CMTM1-219ENST00000533953 TTF1Q15361 905 aaPredicted RBP16.26■□□□□ 0.19
CMTM1-219ENST00000533953 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
CMTM1-219ENST00000533953 PI4K2BQ8TCG2 481 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 TGFBRAP1Q8WUH2 860 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
CMTM1-219ENST00000533953 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
CMTM1-219ENST00000533953 RFX7Q2KHR2 1363 aa16.26■□□□□ 0.19
CMTM1-219ENST00000533953 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 FAM196BA6NMK8 535 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 ENTPD3O75355 529 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 BAG3O95817 575 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 SLC10A3P09131 477 aa16.25■□□□□ 0.19
CMTM1-219ENST00000533953 HSPA1AP0DMV8 641 aaKnown RBP16.25■□□□□ 0.19
CMTM1-219ENST00000533953 HSPA1BP0DMV9 641 aaKnown RBP16.25■□□□□ 0.19
CMTM1-219ENST00000533953 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms