RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 USHBP1Q8N6Y0 703 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 ZSCAN1Q8NBB4 408 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 EXOC6Q8TAG9 804 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 MBIPQ9NS73 344 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 RNF19AQ9NV58 838 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 STIM2Q9P246 746 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 MRC1P22897 1456 aa7.28□□□□□ -1.24
CHKA-208ENST00000533910 SERTM1A2A2V5 107 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 ZC3H6P61129 1189 aaKnown RBP7.27□□□□□ -1.25
CHKA-208ENST00000533910 DCTN1Q14203 1278 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 ALDH1L2Q3SY69 923 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 MCM10Q7L590 875 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 ALDH16A1Q8IZ83 802 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 LRRC59Q96AG4 307 aaKnown RBP7.27□□□□□ -1.25
CHKA-208ENST00000533910 NLRP3Q96P20 1036 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 CRBNQ96SW2 442 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 BCL11AQ9H165 835 aa7.27□□□□□ -1.25
CHKA-208ENST00000533910 GNAT3A8MTJ3 354 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 P4HBP07237 508 aaKnown RBP7.26□□□□□ -1.25
CHKA-208ENST00000533910 TXLNAP40222 546 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 DGKZQ13574 1117 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 TEAD4Q15561 434 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 AMOTQ4VCS5 1084 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 ZSCAN29Q8IWY8 852 aaPredicted RBP7.26□□□□□ -1.25
CHKA-208ENST00000533910 ETFBKMTQ8IXQ9 262 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 STAG2Q8N3U4 1231 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 SSH1Q8WYL5 1049 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 INSM2Q96T92 566 aaPredicted RBP7.26□□□□□ -1.25
CHKA-208ENST00000533910 TSEN34Q9BSV6 310 aaKnown RBP7.26□□□□□ -1.25
CHKA-208ENST00000533910 PHACTR1Q9C0D0 580 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 BABAM1Q9NWV8 329 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 BRPF3Q9ULD4 1205 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 NWD2Q9ULI1 1742 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 WDR17Q8IZU2 1322 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 KIF16BQ96L93 1317 aa7.26□□□□□ -1.25
CHKA-208ENST00000533910 VAMP4O75379 141 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 PHKA2P46019 1235 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 TMEM214Q6NUQ4 689 aaKnown RBP7.25□□□□□ -1.25
CHKA-208ENST00000533910 RGL4Q8IZJ4 473 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 RTF1Q92541 710 aaKnown RBP7.25□□□□□ -1.25
CHKA-208ENST00000533910 ZSCAN10Q96SZ4 725 aaPredicted RBP7.25□□□□□ -1.25
CHKA-208ENST00000533910 SMC4Q9NTJ3 1288 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 PAPPAQ13219 1627 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 SOS1Q07889 1333 aaPredicted RBP7.25□□□□□ -1.25
CHKA-208ENST00000533910 ERBB4Q15303 1308 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 GLI3P10071 1580 aa7.25□□□□□ -1.25
CHKA-208ENST00000533910 SOBPA7XYQ1 873 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 NDUFB5O43674 189 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 CANXP27824 592 aaKnown RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 DNM1Q05193 864 aaKnown RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 TWISTNBQ3B726 338 aaPredicted RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 PLEKHO1Q53GL0 409 aaPredicted RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 EAPPQ56P03 285 aaPredicted RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 AKAP4Q5JQC9 854 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 ZKSCAN2Q63HK3 967 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 ZNF530Q6P9A1 599 aaPredicted RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 TSPYL6Q8N831 410 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 C8orf58Q8NAV2 365 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 IL17REQ8NFR9 667 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 CCDC136Q96JN2 1154 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 RBCK1Q9BYM8 510 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 PRDM11Q9NQV5 511 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.24□□□□□ -1.251e-7■■■■■ 115.4
CHKA-208ENST00000533910 WWC3Q9ULE0 1092 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 POLIQ9UNA4 740 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 LAS1LQ9Y4W2 734 aaKnown RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 RGS12O14924 1447 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 KDM6AO15550 1401 aaPredicted RBP7.24□□□□□ -1.25
CHKA-208ENST00000533910 TOGARAM1Q9Y4F4 1720 aa7.24□□□□□ -1.25
CHKA-208ENST00000533910 LAMB4A4D0S4 1761 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 UBR2Q8IWV8 1755 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 C5P01031 1676 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 GPR182O15218 404 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 RLBP1P12271 317 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 TRIM27P14373 513 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 MAPK8P45983 427 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 PLA2G4AP47712 749 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 POTEAQ6S8J7 498 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 ATF7IPQ6VMQ6 1270 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 EDEM1Q92611 657 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 ARHGAP45Q92619 1136 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 IFT43Q96FT9 208 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 MYO19Q96H55 970 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 FAM161BQ96MY7 647 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 IGSF5Q9NSI5 407 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 NLRP2Q9NX02 1062 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 KDM2BQ8NHM5 1336 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 LRP6O75581 1613 aa7.23□□□□□ -1.25
CHKA-208ENST00000533910 DISP2A7MBM2 1401 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 A6NHS1 94 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 IGHA2P01877 340 aa7.22□□□□□ -1.25
CHKA-208ENST00000533910 CTSOP43234 321 aaPredicted RBP7.22□□□□□ -1.25
CHKA-208ENST00000533910 MVPQ14764 893 aaKnown RBP7.22□□□□□ -1.25
CHKA-208ENST00000533910 C11orf91Q3C1V1 193 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms