RNA–Protein interactions for RNA: ENST00000533845.1

PDE4DIP-233, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-233	ENST00000533845	CSRNP1	Q96S65	589 aa		14.03	□□□□□ -0.16
PDE4DIP-233	ENST00000533845	BEGAIN	Q9BUH8	593 aa		14.03	□□□□□ -0.16
PDE4DIP-233	ENST00000533845	TMEM39B	Q9GZU3	492 aa		14.03	□□□□□ -0.16
PDE4DIP-233	ENST00000533845	TMOD2	Q9NZR1	351 aa		14.03	□□□□□ -0.16
PDE4DIP-233	ENST00000533845	ABCF2	Q9UG63	623 aa		14.03	□□□□□ -0.16
PDE4DIP-233	ENST00000533845	CACNB3	P54284	484 aa		14.02	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	PRKG1	Q13976	671 aa		14.02	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	CDAN1	Q8IWY9	1227 aa		14.02	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	SLF2	Q8IX21	1173 aa		14.02	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RHPN1	Q8TCX5	695 aa		14.02	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	FZD1	Q9UP38	647 aa		14.02	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RPAP1	Q9BWH6	1393 aa	Predicted RBP	14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	GPR75-ASB3	A0A0A6YYF3	556 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RAB11FIP3	O75154	756 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	IREB2	P48200	963 aa	Known RBP	14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	MECOM	Q03112	1051 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TTC39A	Q5SRH9	613 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TBC1D9	Q6ZT07	1266 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	DZIP1	Q86YF9	867 aa	Known RBP	14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	FAM151A	Q8WW52	585 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	NSUN4	Q96CB9	384 aa	Known RBP	14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	KIF1BP	Q96EK5	621 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	IDI2	Q9BXS1	227 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	CCDC8	Q9H0W5	538 aa	Predicted RBP	14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	USP40	Q9NVE5	1235 aa		14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TLR7	Q9NYK1	1049 aa	Known RBP	14.01	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TM4SF4	P48230	202 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	LBX1	P52954	281 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	NFIA	Q12857	509 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	SPRYD7	Q5W111	196 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	ANKRD13A	Q8IZ07	590 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	SLC10A4	Q96EP9	437 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	SAGE1	Q9NXZ1	904 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	FAM198A	Q9UFP1	575 aa		14	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	MROH7-TTC4	A0A0A0MT08	1334 aa		13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	MAP4K4	O95819	1239 aa	Predicted RBP	13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	CYP2E1	P05181	493 aa	Predicted RBP	13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	LDHC	P07864	332 aa		13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RRP1	P56182	461 aa	Known RBP	13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	GSTO1	P78417	241 aa		13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	AACS	Q86V21	672 aa		13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	HOOK2	Q96ED9	719 aa		13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	CLMN	Q96JQ2	1002 aa		13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	YTHDC1	Q96MU7	727 aa	Known RBP	13.99	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RFX7	Q2KHR2	1363 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	AKAP11	Q9UKA4	1901 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	ENTPD3	O75355	529 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	NPM3	O75607	178 aa	Known RBP	13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	WDHD1	O75717	1129 aa	Predicted RBP	13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	ZBTB48	P10074	688 aa	Predicted RBP	13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	BTD	P43251	543 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	ZAP70	P43403	619 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RHBDL3	P58872	404 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	MAP3K9	P80192	1104 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	CLASRP	Q8N2M8	674 aa	Known RBP	13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	IL1RAPL2	Q9NP60	686 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	SNRK	Q9NRH2	765 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RNF186	Q9NXI6	227 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RAI14	Q9P0K7	980 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	LRP2BP	Q9P2M1	347 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	MYH2	Q9UKX2	1941 aa		13.98	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	INHBE	P58166	350 aa		13.97	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	MAP3K10	Q02779	954 aa		13.97	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	ZFPM1	Q8IX07	1006 aa		13.97	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	WNK4	Q96J92	1243 aa		13.97	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	GJA5	P36382	358 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	RGS3	P49796	1198 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	PPP4C	P60510	307 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TCP10	Q12799	353 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	DCAF15	Q66K64	600 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TMED8	Q6PL24	325 aa	Predicted RBP	13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	DCTPP1	Q9H773	170 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	PIH1D3	Q9NQM4	214 aa	Known RBP	13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	ZNF112	Q9UJU3	913 aa		13.96	□□□□□ -0.17
PDE4DIP-233	ENST00000533845	TESPA1	A2RU30	521 aa	Predicted RBP	13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	MANSC4	A6NHS7	340 aa	Predicted RBP	13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	TRPA1	O75762	1119 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	SREBF2	Q12772	1141 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	VGLL4	Q14135	290 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	NAA16	Q6N069	864 aa	Predicted RBP	13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	SH3BP5L	Q7L8J4	393 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	CFHR5	Q9BXR6	569 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	ZNF341	Q9BYN7	854 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	DDX4	Q9NQI0	724 aa	Known RBP	13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	TSKS	Q9UJT2	592 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	PCDHB15	Q9Y5E8	787 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	ATRNL1	Q5VV63	1379 aa		13.95	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	APBB1	O00213	710 aa		13.94	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	IFIT2	P09913	472 aa	Known RBP	13.94	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	MKRN3	Q13064	507 aa	Known RBP	13.94	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	IFFO2	Q5TF58	517 aa		13.94	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	MIGA2	Q7L4E1	593 aa		13.94	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	ELP3	Q9H9T3	547 aa		13.94	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	SPDYE5	A6NIY4	337 aa		13.93	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	NOM1	Q5C9Z4	860 aa	Known RBP	13.93	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	ADGRA1	Q86SQ6	560 aa		13.93	□□□□□ -0.18
PDE4DIP-233	ENST00000533845	TNS4	Q8IZW8	715 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms