RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 TFCP2Q12800 502 aa21.61■■□□□ 1.05
VPS51-213ENST00000533827 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
VPS51-213ENST00000533827 CDC42EP5Q6NZY7 148 aa21.61■■□□□ 1.05
VPS51-213ENST00000533827 FAM151AQ8WW52 585 aa21.61■■□□□ 1.05
VPS51-213ENST00000533827 HOOK2Q96ED9 719 aa21.61■■□□□ 1.05
VPS51-213ENST00000533827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.61■■□□□ 1.05
VPS51-213ENST00000533827 A0A1B0GUL7 405 aa21.6■■□□□ 1.05
VPS51-213ENST00000533827 XAGE2Q96GT9 111 aa21.6■■□□□ 1.05
VPS51-213ENST00000533827 AKAP2Q9Y2D5 859 aa21.6■■□□□ 1.05
VPS51-213ENST00000533827 PDS5AQ29RF7 1337 aaKnown RBP21.59■■□□□ 1.05
VPS51-213ENST00000533827 SPDYE5A6NIY4 337 aa21.59■■□□□ 1.05
VPS51-213ENST00000533827 CRHR2Q13324 411 aa21.59■■□□□ 1.05
VPS51-213ENST00000533827 RASGRF1Q13972 1273 aa21.59■■□□□ 1.05
VPS51-213ENST00000533827 ZKSCAN2Q63HK3 967 aa21.59■■□□□ 1.05
VPS51-213ENST00000533827 FBXO46Q6PJ61 603 aaPredicted RBP21.59■■□□□ 1.05
VPS51-213ENST00000533827 WRNIP1Q96S55 665 aa21.59■■□□□ 1.05
VPS51-213ENST00000533827 SNCAIPQ9Y6H5 919 aa21.59■■□□□ 1.05
VPS51-213ENST00000533827 PNMA6EA0A0J9YXQ4 647 aa21.58■■□□□ 1.05
VPS51-213ENST00000533827 GTF2A2P52657 109 aa21.58■■□□□ 1.05
VPS51-213ENST00000533827 DCAF15Q66K64 600 aa21.58■■□□□ 1.05
VPS51-213ENST00000533827 ZGPATQ8N5A5 531 aaKnown RBP21.58■■□□□ 1.05
VPS51-213ENST00000533827 TMEM57Q8N5G2 664 aa21.58■■□□□ 1.05
VPS51-213ENST00000533827 BRI3BPQ8WY22 251 aa21.58■■□□□ 1.05
VPS51-213ENST00000533827 ZKSCAN4Q969J2 545 aaPredicted RBP21.58■■□□□ 1.05
VPS51-213ENST00000533827 OTUD5Q96G74 571 aa21.58■■□□□ 1.05
VPS51-213ENST00000533827 SOX10P56693 466 aa21.57■■□□□ 1.04
VPS51-213ENST00000533827 TCP10Q12799 353 aa21.57■■□□□ 1.04
VPS51-213ENST00000533827 NFIAQ12857 509 aa21.57■■□□□ 1.04
VPS51-213ENST00000533827 ZNF341Q9BYN7 854 aa21.57■■□□□ 1.04
VPS51-213ENST00000533827 USP40Q9NVE5 1235 aa21.57■■□□□ 1.04
VPS51-213ENST00000533827 FAM198AQ9UFP1 575 aa21.57■■□□□ 1.04
VPS51-213ENST00000533827 GAKO14976 1311 aa21.56■■□□□ 1.04
VPS51-213ENST00000533827 CCL15-CCL14A0A0B4J2E2 113 aa21.56■■□□□ 1.04
VPS51-213ENST00000533827 MVPQ14764 893 aaKnown RBP21.56■■□□□ 1.04
VPS51-213ENST00000533827 CCL15Q16663 113 aa21.56■■□□□ 1.04
VPS51-213ENST00000533827 MIGA2Q7L4E1 593 aa21.56■■□□□ 1.04
VPS51-213ENST00000533827 ERO1BQ86YB8 467 aa21.56■■□□□ 1.04
VPS51-213ENST00000533827 MYH2Q9UKX2 1941 aa21.56■■□□□ 1.04
VPS51-213ENST00000533827 TNRC18O15417 2968 aaPredicted RBP21.55■■□□□ 1.04
VPS51-213ENST00000533827 NEUROD6Q96NK8 337 aa21.55■■□□□ 1.04
VPS51-213ENST00000533827 ABCF2Q9UG63 623 aa21.55■■□□□ 1.04
VPS51-213ENST00000533827 ZNF112Q9UJU3 913 aa21.55■■□□□ 1.04
VPS51-213ENST00000533827 FAM43AQ8N2R8 423 aa21.54■■□□□ 1.04
VPS51-213ENST00000533827 FAM163AQ96GL9 167 aaPredicted RBP21.54■■□□□ 1.04
VPS51-213ENST00000533827 ERO1AQ96HE7 468 aa21.54■■□□□ 1.04
VPS51-213ENST00000533827 IDI2Q9BXS1 227 aa21.54■■□□□ 1.04
VPS51-213ENST00000533827 TRIM17Q9Y577 477 aa21.54■■□□□ 1.04
VPS51-213ENST00000533827 IRF6O14896 467 aa21.53■■□□□ 1.04
VPS51-213ENST00000533827 INPP5BP32019 993 aa21.53■■□□□ 1.04
VPS51-213ENST00000533827 G3BP1Q13283 466 aaKnown RBP eCLIP21.53■■□□□ 1.046e-7■■■■□ 25.8
VPS51-213ENST00000533827 PPIL2Q13356 520 aa21.53■■□□□ 1.04
VPS51-213ENST00000533827 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
VPS51-213ENST00000533827 OTOP1Q7RTM1 612 aa21.53■■□□□ 1.04
VPS51-213ENST00000533827 DZIP1Q86YF9 867 aaKnown RBP21.53■■□□□ 1.04
VPS51-213ENST00000533827 ZFPM1Q8IX07 1006 aa21.53■■□□□ 1.04
VPS51-213ENST00000533827 RFX7Q2KHR2 1363 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 CETPP11597 493 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 SP3Q02447 781 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 PPATQ06203 517 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 POLA2Q14181 598 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 SLF2Q8IX21 1173 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 CD99L2Q8TCZ2 262 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 HMG20BQ9P0W2 317 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 HTTP42858 3142 aa21.52■■□□□ 1.04
VPS51-213ENST00000533827 AK9Q5TCS8 1911 aa21.51■■□□□ 1.03
VPS51-213ENST00000533827 ENTPD3O75355 529 aa21.51■■□□□ 1.03
VPS51-213ENST00000533827 ARID4AP29374 1257 aaPredicted RBP21.51■■□□□ 1.03
VPS51-213ENST00000533827 TAF1CQ15572 869 aaPredicted RBP21.51■■□□□ 1.03
VPS51-213ENST00000533827 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
VPS51-213ENST00000533827 SSH3Q8TE77 659 aa21.51■■□□□ 1.03
VPS51-213ENST00000533827 ZFYVE28Q9HCC9 887 aa21.51■■□□□ 1.03
VPS51-213ENST00000533827 ATRNL1Q5VV63 1379 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 RGS3P49796 1198 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 CAP1Q01518 475 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 MECOMQ03112 1051 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 SNAPC2Q13487 334 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 GORABQ5T7V8 394 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 SPATA5Q8NB90 893 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 ZNF384Q8TF68 577 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 ZCCHC17Q9NP64 241 aaKnown RBP21.5■■□□□ 1.03
VPS51-213ENST00000533827 MROH7-TTC4A0A0A0MT08 1334 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 DOCK2Q92608 1830 aa21.5■■□□□ 1.03
VPS51-213ENST00000533827 ZBTB7BO15156 539 aaPredicted RBP21.49■■□□□ 1.03
VPS51-213ENST00000533827 WDHD1O75717 1129 aaPredicted RBP21.49■■□□□ 1.03
VPS51-213ENST00000533827 BTDP43251 543 aa21.49■■□□□ 1.03
VPS51-213ENST00000533827 NOL9Q5SY16 702 aaKnown RBP21.49■■□□□ 1.03
VPS51-213ENST00000533827 PI16Q6UXB8 463 aa21.49■■□□□ 1.03
VPS51-213ENST00000533827 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
VPS51-213ENST00000533827 PTPN22Q9Y2R2 807 aa21.49■■□□□ 1.03
VPS51-213ENST00000533827 GPR75-ASB3A0A0A6YYF3 556 aa21.48■■□□□ 1.03
VPS51-213ENST00000533827 BTBD19C9JJ37 291 aa21.48■■□□□ 1.03
VPS51-213ENST00000533827 RLBP1P12271 317 aa21.48■■□□□ 1.03
VPS51-213ENST00000533827 SH3BP5LQ7L8J4 393 aa21.48■■□□□ 1.03
VPS51-213ENST00000533827 EFCC1Q9HA90 598 aa21.48■■□□□ 1.03
VPS51-213ENST00000533827 GPR108Q9NPR9 543 aa21.48■■□□□ 1.03
VPS51-213ENST00000533827 DDX4Q9NQI0 724 aaKnown RBP21.48■■□□□ 1.03
VPS51-213ENST00000533827 MCAMP43121 646 aa21.47■■□□□ 1.03
VPS51-213ENST00000533827 RHBDL3P58872 404 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms