RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 MAST2Q6P0Q8 1798 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 UNCXA6NJT0 531 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 SLC10A3P09131 477 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 HSPA1AP0DMV8 641 aaKnown RBP19.34■□□□□ 0.69
TSKU-204ENST00000533752 HSPA1BP0DMV9 641 aaKnown RBP19.34■□□□□ 0.69
TSKU-204ENST00000533752 MAP3K11Q16584 847 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 NBPF12Q5TAG4 269 aaPredicted RBP19.34■□□□□ 0.69
TSKU-204ENST00000533752 CDC42EP5Q6NZY7 148 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 SNRKQ9NRH2 765 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 PCNTO95613 3336 aa19.34■□□□□ 0.69
TSKU-204ENST00000533752 MYH2Q9UKX2 1941 aa19.33■□□□□ 0.69
TSKU-204ENST00000533752 MAP4K4O95819 1239 aaPredicted RBP19.33■□□□□ 0.68
TSKU-204ENST00000533752 IREB2P48200 963 aaKnown RBP19.33■□□□□ 0.68
TSKU-204ENST00000533752 CACNB3P54284 484 aa19.33■□□□□ 0.68
TSKU-204ENST00000533752 TBC1D9Q6ZT07 1266 aa19.33■□□□□ 0.68
TSKU-204ENST00000533752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.33■□□□□ 0.68
TSKU-204ENST00000533752 NSUN4Q96CB9 384 aaKnown RBP19.33■□□□□ 0.68
TSKU-204ENST00000533752 TMEM39BQ9GZU3 492 aa19.33■□□□□ 0.68
TSKU-204ENST00000533752 USP40Q9NVE5 1235 aa19.33■□□□□ 0.68
TSKU-204ENST00000533752 ANGEL1Q9UNK9 670 aaKnown RBP19.33■□□□□ 0.68
TSKU-204ENST00000533752 AKAP11Q9UKA4 1901 aa19.33■□□□□ 0.68
TSKU-204ENST00000533752 UBE2Q2LH0YL09 131 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 CYP2E1P05181 493 aaPredicted RBP19.32■□□□□ 0.68
TSKU-204ENST00000533752 ZAP70P43403 619 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 TMED8Q6PL24 325 aaPredicted RBP19.32■□□□□ 0.68
TSKU-204ENST00000533752 MOB2Q70IA6 237 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 RASAL3Q86YV0 1011 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 TEPSINQ96N21 525 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 BEGAINQ9BUH8 593 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 DCTPP1Q9H773 170 aa19.32■□□□□ 0.68
TSKU-204ENST00000533752 GPR75-ASB3A0A0A6YYF3 556 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 FAM155AB1AL88 458 aaPredicted RBP19.31■□□□□ 0.68
TSKU-204ENST00000533752 AOC2O75106 756 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 BTDP43251 543 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 PRKG1Q13976 671 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 LDLRAD1Q5T700 205 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 NAA16Q6N069 864 aaPredicted RBP19.31■□□□□ 0.68
TSKU-204ENST00000533752 FAM151AQ8WW52 585 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
TSKU-204ENST00000533752 WBP1LQ9NX94 342 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
TSKU-204ENST00000533752 TTF1Q15361 905 aaPredicted RBP19.3■□□□□ 0.68
TSKU-204ENST00000533752 REM2Q8IYK8 340 aaPredicted RBP19.3■□□□□ 0.68
TSKU-204ENST00000533752 IDI2Q9BXS1 227 aa19.3■□□□□ 0.68
TSKU-204ENST00000533752 RFX7Q2KHR2 1363 aa19.3■□□□□ 0.68
TSKU-204ENST00000533752 CA12O43570 354 aa19.29■□□□□ 0.68
TSKU-204ENST00000533752 ENTPD3O75355 529 aa19.29■□□□□ 0.68
TSKU-204ENST00000533752 BAG3O95817 575 aa19.29■□□□□ 0.68
TSKU-204ENST00000533752 PLCG2P16885 1265 aa19.29■□□□□ 0.68
TSKU-204ENST00000533752 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
TSKU-204ENST00000533752 ZNF384Q8TF68 577 aa19.29■□□□□ 0.68
TSKU-204ENST00000533752 IDH1O75874 414 aaKnown RBP19.28■□□□□ 0.68
TSKU-204ENST00000533752 MAP3K12Q12852 859 aa19.28■□□□□ 0.68
TSKU-204ENST00000533752 NFIAQ12857 509 aa19.28■□□□□ 0.68
TSKU-204ENST00000533752 CERS3Q8IU89 383 aa19.28■□□□□ 0.68
TSKU-204ENST00000533752 ANKRD13AQ8IZ07 590 aa19.28■□□□□ 0.68
TSKU-204ENST00000533752 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
TSKU-204ENST00000533752 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
TSKU-204ENST00000533752 PIH1D3Q9NQM4 214 aaKnown RBP19.28■□□□□ 0.68
TSKU-204ENST00000533752 USP2O75604 605 aaPredicted RBP19.27■□□□□ 0.68
TSKU-204ENST00000533752 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
TSKU-204ENST00000533752 CTCFP49711 727 aaPredicted RBP19.27■□□□□ 0.68
TSKU-204ENST00000533752 RGS3P49796 1198 aa19.27■□□□□ 0.68
TSKU-204ENST00000533752 TCP10Q12799 353 aa19.27■□□□□ 0.68
TSKU-204ENST00000533752 CDAN1Q8IWY9 1227 aa19.27■□□□□ 0.68
TSKU-204ENST00000533752 FAM198AQ9UFP1 575 aa19.27■□□□□ 0.68
TSKU-204ENST00000533752 WDHD1O75717 1129 aaPredicted RBP19.26■□□□□ 0.67
TSKU-204ENST00000533752 ATP5JP18859 108 aa19.26■□□□□ 0.67
TSKU-204ENST00000533752 RHBDL3P58872 404 aa19.26■□□□□ 0.67
TSKU-204ENST00000533752 KIF23Q02241 960 aaPredicted RBP19.26■□□□□ 0.67
TSKU-204ENST00000533752 HDAC1Q13547 482 aaPredicted RBP19.26■□□□□ 0.67
TSKU-204ENST00000533752 SLC10A4Q96EP9 437 aa19.26■□□□□ 0.67
TSKU-204ENST00000533752 FZD1Q9UP38 647 aa19.26■□□□□ 0.67
TSKU-204ENST00000533752 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
TSKU-204ENST00000533752 ZBTB48P10074 688 aaPredicted RBP19.25■□□□□ 0.67
TSKU-204ENST00000533752 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
TSKU-204ENST00000533752 ZNF341Q9BYN7 854 aa19.25■□□□□ 0.67
TSKU-204ENST00000533752 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
TSKU-204ENST00000533752 CSADQ9Y600 493 aa19.25■□□□□ 0.67
TSKU-204ENST00000533752 DOCK2Q92608 1830 aa19.25■□□□□ 0.67
TSKU-204ENST00000533752 COL2A1P02458 1487 aaPredicted RBP19.24■□□□□ 0.67
TSKU-204ENST00000533752 FOXN1O15353 648 aa19.24■□□□□ 0.67
TSKU-204ENST00000533752 SMARCA5O60264 1052 aaPredicted RBP19.24■□□□□ 0.67
TSKU-204ENST00000533752 PPP4CP60510 307 aa19.24■□□□□ 0.67
TSKU-204ENST00000533752 MAP3K9P80192 1104 aa19.24■□□□□ 0.67
TSKU-204ENST00000533752 TEX11Q8IYF3 940 aa19.24■□□□□ 0.67
TSKU-204ENST00000533752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.24■□□□□ 0.67
TSKU-204ENST00000533752 GCC1Q96CN9 775 aa19.24■□□□□ 0.67
TSKU-204ENST00000533752 AATFQ9NY61 560 aaKnown RBP eCLIP19.24■□□□□ 0.67
TSKU-204ENST00000533752 ATRNL1Q5VV63 1379 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 GOLIM4O00461 696 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 CYP7A1P22680 504 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 SREBF2Q12772 1141 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 PICALMQ13492 652 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 SPRYD7Q5W111 196 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 ZSCAN29Q8IWY8 852 aaPredicted RBP19.23■□□□□ 0.67
TSKU-204ENST00000533752 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 CLMNQ96JQ2 1002 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 WRNIP1Q96S55 665 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms