RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
CAPRIN1-213ENST00000533562 TFCP2Q12800 502 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 MVPQ14764 893 aaKnown RBP15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 DIXDC1Q155Q3 683 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 CDC42EP5Q6NZY7 148 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 FBXO46Q6PJ61 603 aaPredicted RBP15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 SLF2Q8IX21 1173 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 FAM151AQ8WW52 585 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 DAGLAQ9Y4D2 1042 aa15.36■□□□□ 0.05
CAPRIN1-213ENST00000533562 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 ADORA1P30542 326 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 G3BP1Q13283 466 aaKnown RBP eCLIP15.35■□□□□ 0.052e-7■■□□□ 12.7
CAPRIN1-213ENST00000533562 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 ERO1BQ86YB8 467 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 OTUD5Q96G74 571 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 XAGE2Q96GT9 111 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 NEUROD6Q96NK8 337 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 WRNIP1Q96S55 665 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 PTPN18Q99952 460 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 ZNF341Q9BYN7 854 aa15.35■□□□□ 0.05
CAPRIN1-213ENST00000533562 CCL15-CCL14A0A0B4J2E2 113 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 TCP10Q12799 353 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 CRHR2Q13324 411 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 CCL15Q16663 113 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 MIGA2Q7L4E1 593 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 ZKSCAN4Q969J2 545 aaPredicted RBP15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 ERO1AQ96HE7 468 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 ABCF2Q9UG63 623 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 MYH13Q9UKX3 1938 aa15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 PDS5AQ29RF7 1337 aaKnown RBP15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 RPAP1Q9BWH6 1393 aaPredicted RBP15.34■□□□□ 0.05
CAPRIN1-213ENST00000533562 SPDYE5A6NIY4 337 aa15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 CETPP11597 493 aa15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 RASGRF1Q13972 1273 aa15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 DZIP1Q86YF9 867 aaKnown RBP15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 TMEM57Q8N5G2 664 aa15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 ZFYVE28Q9HCC9 887 aa15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 TNNQ9UQP3 1299 aa15.33■□□□□ 0.04
CAPRIN1-213ENST00000533562 SOX10P56693 466 aa15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 SP3Q02447 781 aa15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 SNAPC2Q13487 334 aa15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 BRI3BPQ8WY22 251 aa15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 FAM163AQ96GL9 167 aaPredicted RBP15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
CAPRIN1-213ENST00000533562 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 PNMA6EA0A0J9YXQ4 647 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 PPATQ06203 517 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 NFIAQ12857 509 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 PPIL2Q13356 520 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 TAF1CQ15572 869 aaPredicted RBP15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 ERICH6Q7L0X2 663 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 TNRC18O15417 2968 aaPredicted RBP15.31■□□□□ 0.04
CAPRIN1-213ENST00000533562 IRF6O14896 467 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 GAKO14976 1311 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 ENTPD3O75355 529 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 AK9Q5TCS8 1911 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 SPATA5Q8NB90 893 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 IDI2Q9BXS1 227 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 ZCCHC17Q9NP64 241 aaKnown RBP15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 CENPFP49454 3210 aa15.3■□□□□ 0.04
CAPRIN1-213ENST00000533562 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 LAMB1P07942 1786 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 LDHCP07864 332 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 UQCRFS1P1P0C7P4 283 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 INPP5BP32019 993 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 RGS3P49796 1198 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 GSTO1P78417 241 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 ATP8B2P98198 1209 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 FAM43AQ8N2R8 423 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
CAPRIN1-213ENST00000533562 HTTP42858 3142 aa15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 MECOMQ03112 1051 aa15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 ITPRIPQ8IWB1 547 aa15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 ZFPM1Q8IX07 1006 aa15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 SSH3Q8TE77 659 aa15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 GPR108Q9NPR9 543 aa15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
CAPRIN1-213ENST00000533562 MYH2Q9UKX2 1941 aa15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 MROH7-TTC4A0A0A0MT08 1334 aa15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 GPR75-ASB3A0A0A6YYF3 556 aa15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 BTBD19C9JJ37 291 aa15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 SURF6O75683 361 aaKnown RBP15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 ARID4AP29374 1257 aaPredicted RBP15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 BTDP43251 543 aa15.27■□□□□ 0.04
CAPRIN1-213ENST00000533562 POLA2Q14181 598 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms