RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CFHR5Q9BXR6 569 aa27.44■■□□□ 1.98
BEST1-207ENST00000533521 C1orf115Q9H7X2 142 aa27.44■■□□□ 1.98
BEST1-207ENST00000533521 DDX19BQ9UMR2 479 aa27.44■■□□□ 1.98
BEST1-207ENST00000533521 DIXDC1Q155Q3 683 aa27.43■■□□□ 1.98
BEST1-207ENST00000533521 TNNI3KQ59H18 835 aa27.43■■□□□ 1.98
BEST1-207ENST00000533521 FAM151AQ8WW52 585 aa27.43■■□□□ 1.98
BEST1-207ENST00000533521 ZNF512BQ96KM6 892 aaPredicted RBP27.43■■□□□ 1.98
BEST1-207ENST00000533521 HMG20BQ9P0W2 317 aa27.43■■□□□ 1.98
BEST1-207ENST00000533521 FPGT-TNNI3KV9GXZ4 949 aa27.43■■□□□ 1.98
BEST1-207ENST00000533521 OTOFQ9HC10 1997 aa27.42■■□□□ 1.98
BEST1-207ENST00000533521 OS9Q13438 667 aaPredicted RBP27.42■■□□□ 1.98
BEST1-207ENST00000533521 CDC42EP5Q6NZY7 148 aa27.42■■□□□ 1.98
BEST1-207ENST00000533521 SPATA5Q8NB90 893 aa27.42■■□□□ 1.98
BEST1-207ENST00000533521 WNK4Q96J92 1243 aa27.42■■□□□ 1.98
BEST1-207ENST00000533521 FZD1Q9UP38 647 aa27.42■■□□□ 1.98
BEST1-207ENST00000533521 CACNB3P54284 484 aa27.41■■□□□ 1.98
BEST1-207ENST00000533521 DZIP1Q86YF9 867 aaKnown RBP27.41■■□□□ 1.98
BEST1-207ENST00000533521 CLMNQ96JQ2 1002 aa27.41■■□□□ 1.98
BEST1-207ENST00000533521 MAP4K4O95819 1239 aaPredicted RBP27.4■■□□□ 1.98
BEST1-207ENST00000533521 ALDH1A1P00352 501 aa27.4■■□□□ 1.98
BEST1-207ENST00000533521 MAP3K9P80192 1104 aa27.4■■□□□ 1.98
BEST1-207ENST00000533521 PDE3AQ14432 1141 aa27.4■■□□□ 1.98
BEST1-207ENST00000533521 ERICH6Q7L0X2 663 aa27.4■■□□□ 1.98
BEST1-207ENST00000533521 CDAN1Q8IWY9 1227 aa27.4■■□□□ 1.98
BEST1-207ENST00000533521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.4■■□□□ 1.98
BEST1-207ENST00000533521 ABCF2Q9UG63 623 aa27.4■■□□□ 1.98
BEST1-207ENST00000533521 HSP90AB4PQ58FF6 505 aa27.39■■□□□ 1.98
BEST1-207ENST00000533521 DCAF15Q66K64 600 aa27.39■■□□□ 1.98
BEST1-207ENST00000533521 ERC1Q8IUD2 1116 aa27.39■■□□□ 1.98
BEST1-207ENST00000533521 RPAP2Q8IXW5 612 aaPredicted RBP27.39■■□□□ 1.98
BEST1-207ENST00000533521 IDI2Q9BXS1 227 aa27.39■■□□□ 1.98
BEST1-207ENST00000533521 ZBTB40Q9NUA8 1239 aa27.39■■□□□ 1.98
BEST1-207ENST00000533521 CCDC158Q5M9N0 1113 aa27.38■■□□□ 1.97
BEST1-207ENST00000533521 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.38■■□□□ 1.97
BEST1-207ENST00000533521 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.38■■□□□ 1.97
BEST1-207ENST00000533521 USP40Q9NVE5 1235 aa27.38■■□□□ 1.97
BEST1-207ENST00000533521 LDHCP07864 332 aa27.37■■□□□ 1.97
BEST1-207ENST00000533521 MCAMP43121 646 aa27.37■■□□□ 1.97
BEST1-207ENST00000533521 GSTO1P78417 241 aa27.37■■□□□ 1.97
BEST1-207ENST00000533521 TESPA1A2RU30 521 aaPredicted RBP27.36■■□□□ 1.97
BEST1-207ENST00000533521 ENTPD3O75355 529 aa27.36■■□□□ 1.97
BEST1-207ENST00000533521 NPM3O75607 178 aaKnown RBP27.36■■□□□ 1.97
BEST1-207ENST00000533521 CSADQ9Y600 493 aa27.36■■□□□ 1.97
BEST1-207ENST00000533521 MROH7-TTC4A0A0A0MT08 1334 aa27.36■■□□□ 1.97
BEST1-207ENST00000533521 RFX7Q2KHR2 1363 aa27.35■■□□□ 1.97
BEST1-207ENST00000533521 GPR75-ASB3A0A0A6YYF3 556 aa27.35■■□□□ 1.97
BEST1-207ENST00000533521 MECOMQ03112 1051 aa27.35■■□□□ 1.97
BEST1-207ENST00000533521 DBNDD2Q9BQY9 259 aa27.35■■□□□ 1.97
BEST1-207ENST00000533521 FAM198AQ9UFP1 575 aa27.35■■□□□ 1.97
BEST1-207ENST00000533521 COG6Q9Y2V7 657 aa27.35■■□□□ 1.97
BEST1-207ENST00000533521 HMMRO75330 724 aa27.34■■□□□ 1.97
BEST1-207ENST00000533521 MKRN3Q13064 507 aaKnown RBP27.34■■□□□ 1.97
BEST1-207ENST00000533521 VGLL4Q14135 290 aa27.34■■□□□ 1.97
BEST1-207ENST00000533521 NSUN4Q96CB9 384 aaKnown RBP27.34■■□□□ 1.97
BEST1-207ENST00000533521 AK9Q5TCS8 1911 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 GJA5P36382 358 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 NFIAQ12857 509 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 TTC39AQ5SRH9 613 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 IFNL1Q8IU54 200 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 ZNF384Q8TF68 577 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 OPTNQ96CV9 577 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 ZNF341Q9BYN7 854 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 ZNF112Q9UJU3 913 aa27.33■■□□□ 1.97
BEST1-207ENST00000533521 OTUD7BQ6GQQ9 843 aa27.32■■□□□ 1.96
BEST1-207ENST00000533521 PI16Q6UXB8 463 aa27.32■■□□□ 1.96
BEST1-207ENST00000533521 EAF2Q96CJ1 260 aaPredicted RBP27.32■■□□□ 1.96
BEST1-207ENST00000533521 ABHD8Q96I13 439 aa27.32■■□□□ 1.96
BEST1-207ENST00000533521 DBNLQ9UJU6 430 aaKnown RBP27.32■■□□□ 1.96
BEST1-207ENST00000533521 SPDYE5A6NIY4 337 aa27.31■■□□□ 1.96
BEST1-207ENST00000533521 ELP3Q9H9T3 547 aa27.31■■□□□ 1.96
BEST1-207ENST00000533521 WDHD1O75717 1129 aaPredicted RBP27.3■■□□□ 1.96
BEST1-207ENST00000533521 BTDP43251 543 aa27.3■■□□□ 1.96
BEST1-207ENST00000533521 MAP3K10Q02779 954 aa27.3■■□□□ 1.96
BEST1-207ENST00000533521 TCP10Q12799 353 aa27.3■■□□□ 1.96
BEST1-207ENST00000533521 TMED8Q6PL24 325 aaPredicted RBP27.3■■□□□ 1.96
BEST1-207ENST00000533521 ERO1BQ86YB8 467 aa27.3■■□□□ 1.96
BEST1-207ENST00000533521 WRNIP1Q96S55 665 aa27.3■■□□□ 1.96
BEST1-207ENST00000533521 LRP2BPQ9P2M1 347 aa27.3■■□□□ 1.96
BEST1-207ENST00000533521 RGS3P49796 1198 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 GTF2A2P52657 109 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 RHBDL3P58872 404 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 TBC1D9Q6ZT07 1266 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 MS4A4AQ96JQ5 239 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 EXOC6BQ9Y2D4 811 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 SNCAIPQ9Y6H5 919 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 MAST2Q6P0Q8 1798 aa27.29■■□□□ 1.96
BEST1-207ENST00000533521 DOCK2Q92608 1830 aa27.28■■□□□ 1.96
BEST1-207ENST00000533521 ATRNL1Q5VV63 1379 aa27.28■■□□□ 1.96
BEST1-207ENST00000533521 GPR25O00155 361 aa27.28■■□□□ 1.96
BEST1-207ENST00000533521 TBC1D8O95759 1140 aa27.28■■□□□ 1.96
BEST1-207ENST00000533521 MCOLN1Q9GZU1 580 aa27.28■■□□□ 1.96
BEST1-207ENST00000533521 RAI14Q9P0K7 980 aa27.28■■□□□ 1.96
BEST1-207ENST00000533521 COL2A1P02458 1487 aaPredicted RBP27.27■■□□□ 1.96
BEST1-207ENST00000533521 IGF2BP3O00425 579 aaKnown RBP eCLIP27.27■■□□□ 1.96
BEST1-207ENST00000533521 RAB11FIP3O75154 756 aa27.27■■□□□ 1.96
BEST1-207ENST00000533521 DGKZQ13574 1117 aa27.27■■□□□ 1.96
BEST1-207ENST00000533521 NOL9Q5SY16 702 aaKnown RBP27.27■■□□□ 1.96
BEST1-207ENST00000533521 SIRT2Q8IXJ6 389 aa27.27■■□□□ 1.96
BEST1-207ENST00000533521 KIF1BPQ96EK5 621 aa27.27■■□□□ 1.96
BEST1-207ENST00000533521 CYP2E1P05181 493 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms