RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GJA5P36382 358 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 RASGRF1Q13972 1273 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 VGLL4Q14135 290 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 DCAF15Q66K64 600 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 SPTY2D1Q68D10 685 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-211ENST00000533492 CDC42EP5Q6NZY7 148 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 DZIP1Q86YF9 867 aaKnown RBP19.07■□□□□ 0.64
CPSF1-211ENST00000533492 SLF2Q8IX21 1173 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.07■□□□□ 0.64
CPSF1-211ENST00000533492 FAM151AQ8WW52 585 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 CFHR5Q9BXR6 569 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 USP40Q9NVE5 1235 aa19.07■□□□□ 0.64
CPSF1-211ENST00000533492 FKTNO75072 461 aa19.06■□□□□ 0.64
CPSF1-211ENST00000533492 TCP10Q12799 353 aa19.06■□□□□ 0.64
CPSF1-211ENST00000533492 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-211ENST00000533492 WRNIP1Q96S55 665 aa19.06■□□□□ 0.64
CPSF1-211ENST00000533492 PDS5AQ29RF7 1337 aaKnown RBP19.05■□□□□ 0.64
CPSF1-211ENST00000533492 IGF2BP3O00425 579 aaKnown RBP eCLIP19.05■□□□□ 0.64
CPSF1-211ENST00000533492 ATP8B2P98198 1209 aa19.05■□□□□ 0.64
CPSF1-211ENST00000533492 PKN2Q16513 984 aaKnown RBP19.05■□□□□ 0.64
CPSF1-211ENST00000533492 R3HDMLQ9H3Y0 253 aa19.05■□□□□ 0.64
CPSF1-211ENST00000533492 AK9Q5TCS8 1911 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 OTUD5Q96G74 571 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 ZNF341Q9BYN7 854 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 C1orf115Q9H7X2 142 aa19.04■□□□□ 0.64
CPSF1-211ENST00000533492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-211ENST00000533492 RPAP1Q9BWH6 1393 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-211ENST00000533492 TESPA1A2RU30 521 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-211ENST00000533492 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-211ENST00000533492 SURF6O75683 361 aaKnown RBP19.03■□□□□ 0.64
CPSF1-211ENST00000533492 RLBP1P12271 317 aa19.03■□□□□ 0.64
CPSF1-211ENST00000533492 GTF2A2P52657 109 aa19.03■□□□□ 0.64
CPSF1-211ENST00000533492 NFIAQ12857 509 aa19.03■□□□□ 0.64
CPSF1-211ENST00000533492 POLA2Q14181 598 aa19.03■□□□□ 0.64
CPSF1-211ENST00000533492 SSH3Q8TE77 659 aa19.03■□□□□ 0.64
CPSF1-211ENST00000533492 ZKSCAN4Q969J2 545 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-211ENST00000533492 OTOFQ9HC10 1997 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 ERO1BQ86YB8 467 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 SPATA5Q8NB90 893 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 MS4A4AQ96JQ5 239 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 PTPN18Q99952 460 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 HMG20BQ9P0W2 317 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 FAM198AQ9UFP1 575 aa19.02■□□□□ 0.64
CPSF1-211ENST00000533492 MYH2Q9UKX2 1941 aa19.02■□□□□ 0.63
CPSF1-211ENST00000533492 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
CPSF1-211ENST00000533492 SPDYE5A6NIY4 337 aa19.01■□□□□ 0.63
CPSF1-211ENST00000533492 UQCRFS1P1P0C7P4 283 aa19.01■□□□□ 0.63
CPSF1-211ENST00000533492 CCL15Q16663 113 aa19.01■□□□□ 0.63
CPSF1-211ENST00000533492 FAM163AQ96GL9 167 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-211ENST00000533492 SNCAIPQ9Y6H5 919 aa19.01■□□□□ 0.63
CPSF1-211ENST00000533492 GAKO14976 1311 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 LDHCP07864 332 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 MS4A1P11836 297 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 MECOMQ03112 1051 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 CRHR2Q13324 411 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 CCDC158Q5M9N0 1113 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 ZSCAN29Q8IWY8 852 aaPredicted RBP19■□□□□ 0.63
CPSF1-211ENST00000533492 GPR108Q9NPR9 543 aa19■□□□□ 0.63
CPSF1-211ENST00000533492 ENTPD3O75355 529 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 WDHD1O75717 1129 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-211ENST00000533492 ARID4AP29374 1257 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-211ENST00000533492 INPP5BP32019 993 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 BTDP43251 543 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 RGS19P49795 217 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 RGS3P49796 1198 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 GSTO1P78417 241 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 MLLT1Q03111 559 aaPredicted RBP18.99■□□□□ 0.63
CPSF1-211ENST00000533492 TNNI3KQ59H18 835 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 TTC39AQ5SRH9 613 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 PI16Q6UXB8 463 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 ZFPM1Q8IX07 1006 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 IDI2Q9BXS1 227 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 HPS5Q9UPZ3 1129 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 FPGT-TNNI3KV9GXZ4 949 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 MROH7-TTC4A0A0A0MT08 1334 aa18.99■□□□□ 0.63
CPSF1-211ENST00000533492 CETPP11597 493 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 SNAPC2Q13487 334 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 TAF1CQ15572 869 aaPredicted RBP18.98■□□□□ 0.63
CPSF1-211ENST00000533492 FBXO46Q6PJ61 603 aaPredicted RBP18.98■□□□□ 0.63
CPSF1-211ENST00000533492 PANK1Q8TE04 598 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 ERO1AQ96HE7 468 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 ZFYVE28Q9HCC9 887 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 LRP2BPQ9P2M1 347 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 LAMB1P07942 1786 aa18.98■□□□□ 0.63
CPSF1-211ENST00000533492 GPR75-ASB3A0A0A6YYF3 556 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 IRF6O14896 467 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 MCAMP43121 646 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 PPATQ06203 517 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 PPIL2Q13356 520 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 PICALMQ13492 652 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 ZNF112Q9UJU3 913 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 NOP58Q9Y2X3 529 aaKnown RBP18.97■□□□□ 0.63
CPSF1-211ENST00000533492 TRIM17Q9Y577 477 aa18.97■□□□□ 0.63
CPSF1-211ENST00000533492 SP3Q02447 781 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms