RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 USP2O75604 605 aaPredicted RBP12.07□□□□□ -0.48
NUP98-220ENST00000533346 LDHCP07864 332 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 ZNF157P51786 506 aaPredicted RBP12.07□□□□□ -0.48
NUP98-220ENST00000533346 NBPF12Q5TAG4 269 aaPredicted RBP12.07□□□□□ -0.48
NUP98-220ENST00000533346 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
NUP98-220ENST00000533346 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 NSUN4Q96CB9 384 aaKnown RBP12.07□□□□□ -0.48
NUP98-220ENST00000533346 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 VEZTQ9HBM0 779 aa12.07□□□□□ -0.48
NUP98-220ENST00000533346 SCAF8Q9UPN6 1271 aaKnown RBP12.07□□□□□ -0.48
NUP98-220ENST00000533346 RFX7Q2KHR2 1363 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 ENTPD3O75355 529 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 GSTO1P78417 241 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 MAP3K10Q02779 954 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 MECOMQ03112 1051 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 DIXDC1Q155Q3 683 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 RASAL3Q86YV0 1011 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 CCDC8Q9H0W5 538 aaPredicted RBP12.06□□□□□ -0.48
NUP98-220ENST00000533346 PRDM10Q9NQV6 1147 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 ABCF2Q9UG63 623 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 OTOFQ9HC10 1997 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 FOCADQ5VW36 1801 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
NUP98-220ENST00000533346 UBE2Q2LH0YL09 131 aa12.05□□□□□ -0.48
NUP98-220ENST00000533346 AOC2O75106 756 aa12.05□□□□□ -0.48
NUP98-220ENST00000533346 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
NUP98-220ENST00000533346 TM4SF4P48230 202 aa12.05□□□□□ -0.48
NUP98-220ENST00000533346 PPP4CP60510 307 aa12.05□□□□□ -0.48
NUP98-220ENST00000533346 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
NUP98-220ENST00000533346 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
NUP98-220ENST00000533346 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
NUP98-220ENST00000533346 COL2A1P02458 1487 aaPredicted RBP12.05□□□□□ -0.48
NUP98-220ENST00000533346 CDK5RAP2Q96SN8 1893 aa12.05□□□□□ -0.48
NUP98-220ENST00000533346 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 ZBTB48P10074 688 aaPredicted RBP12.04□□□□□ -0.48
NUP98-220ENST00000533346 IREB2P48200 963 aaKnown RBP12.04□□□□□ -0.48
NUP98-220ENST00000533346 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
NUP98-220ENST00000533346 LBX1P52954 281 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 RHBDL3P58872 404 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 PI16Q6UXB8 463 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 MOB2Q70IA6 237 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 AACSQ86V21 672 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 TMEM39BQ9GZU3 492 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 TLR7Q9NYK1 1049 aaKnown RBP12.04□□□□□ -0.48
NUP98-220ENST00000533346 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
NUP98-220ENST00000533346 TNRC18O15417 2968 aaPredicted RBP12.03□□□□□ -0.48
NUP98-220ENST00000533346 INHBEP58166 350 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
NUP98-220ENST00000533346 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 TBC1D9Q6ZT07 1266 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 PAXIP1Q6ZW49 1069 aaPredicted RBP12.03□□□□□ -0.48
NUP98-220ENST00000533346 CERS3Q8IU89 383 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.03□□□□□ -0.48
NUP98-220ENST00000533346 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
NUP98-220ENST00000533346 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 ZIC5Q96T25 663 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 LRRCC1Q9C099 1032 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
NUP98-220ENST00000533346 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 WDHD1O75717 1129 aaPredicted RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 HSPA8P11142 646 aaKnown RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 BTDP43251 543 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 ZAP70P43403 619 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 NFIAQ12857 509 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 TTLL12Q14166 644 aaPredicted RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 NOM1Q5C9Z4 860 aaKnown RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 DCAF15Q66K64 600 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.49
NUP98-220ENST00000533346 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 IL1RAPL2Q9NP60 686 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 LRP2BPQ9P2M1 347 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
NUP98-220ENST00000533346 TBC1D12O60347 775 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
NUP98-220ENST00000533346 PLCG2P16885 1265 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 ATP5JP18859 108 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 CACNB3P54284 484 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 NAA16Q6N069 864 aaPredicted RBP12.01□□□□□ -0.49
NUP98-220ENST00000533346 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 ABHD8Q96I13 439 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
NUP98-220ENST00000533346 MYH7P12883 1935 aa12□□□□□ -0.49
NUP98-220ENST00000533346 MANSC4A6NHS7 340 aaPredicted RBP12□□□□□ -0.49
NUP98-220ENST00000533346 BAG3O95817 575 aa12□□□□□ -0.49
NUP98-220ENST00000533346 RGS3P49796 1198 aa12□□□□□ -0.49
NUP98-220ENST00000533346 SREBF2Q12772 1141 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms