RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-210	ENST00000533279	CCDC171	Q6TFL3	1326 aa		13.62	□□□□□ -0.23
GMDS-210	ENST00000533279	GPAA1	O43292	621 aa		13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	APP	P05067	770 aa		13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	MCC	P23508	829 aa		13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	ZNF280A	P59817	542 aa	Predicted RBP	13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	RBM26	Q5T8P6	1007 aa	Known RBP	13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	TEX11	Q8IYF3	940 aa		13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	FAM227B	Q96M60	508 aa		13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	ESYT1	Q9BSJ8	1104 aa		13.61	□□□□□ -0.23
GMDS-210	ENST00000533279	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	GPR75-ASB3	A0A0A6YYF3	556 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279		A0A0D9SFI3	127 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	TCRBV5S4A2T	A0A5A2	114 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	TNNI2	P48788	182 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	PNMA8A	Q86V59	439 aa	Predicted RBP	13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	MTMR14	Q8NCE2	650 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	ANO2	Q9NQ90	1003 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	USP40	Q9NVE5	1235 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	SLC4A4	Q9Y6R1	1079 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	MYH2	Q9UKX2	1941 aa		13.6	□□□□□ -0.23
GMDS-210	ENST00000533279	SPDYE2B	A6NHP3	402 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	SGSM2	O43147	1006 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	SPDYE6	P0CI01	402 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	TDO2	P48775	406 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	PPP4C	P60510	307 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	GRIK5	Q16478	980 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	OSBP2	Q969R2	916 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	PUS7L	Q9H0K6	701 aa	Known RBP	13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	ARMT1	Q9H993	441 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	VEZT	Q9HBM0	779 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	ATP8A2	Q9NTI2	1148 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279	CTNNA3	Q9UI47	895 aa		13.59	□□□□□ -0.23
GMDS-210	ENST00000533279		M0R2C6	588 aa		13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	VEGFA	P15692	232 aa	Predicted RBP	13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	EPHX2	P34913	555 aa		13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	USP50	Q70EL3	339 aa	Predicted RBP	13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	LCORL	Q8N3X6	602 aa		13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	TRIM34	Q9BYJ4	488 aa		13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	NAPB	Q9H115	298 aa		13.58	□□□□□ -0.24
GMDS-210	ENST00000533279	HLA-DOA	P06340	250 aa		13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	SLC3A2	P08195	630 aa	Known RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	EAPP	Q56P03	285 aa	Predicted RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	RNF20	Q5VTR2	975 aa		13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	GIMAP6	Q6P9H5	292 aa		13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	SAMD7	Q7Z3H4	446 aa		13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	ADGRA1	Q86SQ6	560 aa		13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	DCPS	Q96C86	337 aa	Known RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	DSCC1	Q9BVC3	393 aa		13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	TDRD3	Q9H7E2	651 aa	Known RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279		U3KPZ7	1027 aa	Predicted RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	ZNF646	O15015	1829 aa	Predicted RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.57	□□□□□ -0.24
GMDS-210	ENST00000533279	SCN4A	P35499	1836 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	PATL2	C9JE40	543 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	WNT10B	O00744	389 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	EPB41L2	O43491	1005 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	EPS15	P42566	896 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	DYNLL1	P63167	89 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	SPDYE2	Q495Y8	402 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	CDC42EP5	Q6NZY7	148 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	CCDC129	Q6ZRS4	1044 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	ZNF526	Q8TF50	670 aa	Predicted RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	TGFBRAP1	Q8WUH2	860 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	HOOK2	Q96ED9	719 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	STRBP	Q96SI9	672 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	SEC62	Q99442	399 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	RIOK1	Q9BRS2	568 aa	Known RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	ZNF70	Q9UC06	446 aa	Predicted RBP	13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	WDR90	Q96KV7	1748 aa		13.56	□□□□□ -0.24
GMDS-210	ENST00000533279	CLRN2	A0PK11	232 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	POLR3D	P05423	398 aa	Predicted RBP	13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	ZKSCAN1	P17029	563 aa	Predicted RBP	13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	PICALM	Q13492	652 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	IMMT	Q16891	758 aa	Known RBP	13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	FKBP1C	Q5VVH2	108 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	SULF1	Q8IWU6	871 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	ZNF384	Q8TF68	577 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	ZC3H15	Q8WU90	426 aa	Known RBP	13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	ZNF287	Q9HBT7	754 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	CLEC11A	Q9Y240	323 aa		13.55	□□□□□ -0.24
GMDS-210	ENST00000533279	ENTPD3	O75355	529 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	HSPD1	P10809	573 aa	Known RBP	13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	SLFNL1	Q499Z3	407 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	C8orf34	Q49A92	452 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	TTC6	Q86TZ1	520 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	MAPKAPK5	Q8IW41	473 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	TRPM4	Q8TD43	1214 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	PRMT6	Q96LA8	375 aa	Predicted RBP	13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	IDI2	Q9BXS1	227 aa		13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	DHX36	Q9H2U1	1008 aa	Known RBP	13.54	□□□□□ -0.24
GMDS-210	ENST00000533279	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms