RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 NPHS2Q9NP85 383 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 SLC6A14Q9UN76 642 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 ABCA9Q8IUA7 1624 aa7.41□□□□□ -1.22
C11orf54-212ENST00000533154 FGRP09769 529 aa7.4□□□□□ -1.22
C11orf54-212ENST00000533154 GTF2F1P35269 517 aaKnown RBP eCLIP7.4□□□□□ -1.22
C11orf54-212ENST00000533154 MEI1Q5TIA1 1274 aa7.4□□□□□ -1.22
C11orf54-212ENST00000533154 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.22
C11orf54-212ENST00000533154 VPS37DQ86XT2 251 aa7.4□□□□□ -1.22
C11orf54-212ENST00000533154 HIRIP3Q9BW71 556 aaPredicted RBP7.4□□□□□ -1.22
C11orf54-212ENST00000533154 CHRDQ9H2X0 955 aa7.4□□□□□ -1.22
C11orf54-212ENST00000533154 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
C11orf54-212ENST00000533154 ADAMTSL3P82987 1691 aa7.4□□□□□ -1.23
C11orf54-212ENST00000533154 SAMD9Q5K651 1589 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 PTPRMP28827 1452 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 EGFRP00533 1210 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
C11orf54-212ENST00000533154 TYRO3Q06418 890 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 PSAPL1Q6NUJ1 521 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 CMTR1Q8N1G2 835 aaKnown RBP7.39□□□□□ -1.23
C11orf54-212ENST00000533154 CEP63Q96MT8 703 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 NOC4LQ9BVI4 516 aaKnown RBP7.39□□□□□ -1.23
C11orf54-212ENST00000533154 TMEM63CQ9P1W3 806 aa7.39□□□□□ -1.23
C11orf54-212ENST00000533154 CDK11AQ9UQ88 783 aaPredicted RBP7.39□□□□□ -1.23
C11orf54-212ENST00000533154 RAPGEF6Q8TEU7 1601 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 PHLDB1Q86UU1 1377 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 MED26O95402 600 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 RASGRP4Q8TDF6 673 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 PMEPA1Q969W9 287 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 BCO2Q9BYV7 579 aa7.38□□□□□ -1.23
C11orf54-212ENST00000533154 FRMPD1Q5SYB0 1578 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 NUP153P49790 1475 aaKnown RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 RGS9O75916 674 aaPredicted RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 NCLP19338 710 aaKnown RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 GRNP28799 593 aaKnown RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 GSTT1P30711 240 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 NXPE4Q6UWF7 544 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 MCF2L2Q86YR7 1114 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 FBXO41Q8TF61 875 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 ABI2Q9NYB9 513 aaPredicted RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 USP20Q9Y2K6 914 aa7.37□□□□□ -1.23
C11orf54-212ENST00000533154 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 SUPT16HQ9Y5B9 1047 aaKnown RBP7.37□□□□□ -1.23
C11orf54-212ENST00000533154 NEO1Q92859 1461 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 BCORL1Q5H9F3 1711 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 ATF4P18848 351 aaPredicted RBP7.36□□□□□ -1.23
C11orf54-212ENST00000533154 JAG1P78504 1218 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 KIAA0319Q5VV43 1072 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 NLRP13Q86W25 1043 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 GPRASP2Q96D09 838 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 TRAK1Q9UPV9 953 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 MADDQ8WXG6 1647 aa7.36□□□□□ -1.23
C11orf54-212ENST00000533154 EREGO14944 169 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 XYLBO75191 536 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-212ENST00000533154 STK10O94804 968 aaKnown RBP7.35□□□□□ -1.23
C11orf54-212ENST00000533154 PAK2Q13177 524 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 PWP1Q13610 501 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 GRM2Q14416 872 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 CCDC144BQ3MJ40 725 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 FBXO11Q86XK2 927 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 RSRP1Q9BUV0 290 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 PPM1HQ9ULR3 514 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 FHOD3Q2V2M9 1422 aa7.35□□□□□ -1.23
C11orf54-212ENST00000533154 ARID4BQ4LE39 1312 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-212ENST00000533154 KIAA1324LA8MWY0 1029 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-212ENST00000533154 TGFB1P01137 390 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 NBPF6Q5VWK0 638 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 PRPF40BQ6NWY9 871 aaKnown RBP7.34□□□□□ -1.23
C11orf54-212ENST00000533154 C1orf127Q8N9H9 656 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 NBPF4Q96M43 638 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.34□□□□□ -1.23
C11orf54-212ENST00000533154 NAGPAQ9UK23 515 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 LMTK3Q96Q04 1460 aa7.34□□□□□ -1.23
C11orf54-212ENST00000533154 RICTORQ6R327 1708 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 SIGLEC1Q9BZZ2 1709 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 PLEKHD1A6NEE1 506 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 POLR3DP05423 398 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-212ENST00000533154 XRCC5P13010 732 aaKnown RBP7.33□□□□□ -1.24
C11orf54-212ENST00000533154 EDN3P14138 238 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 IGF2-ASQ6U949 168 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 ILDR2Q71H61 639 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 DTWD1Q8N5C7 304 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 C3orf58Q8NDZ4 430 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 GLIS3Q8NEA6 775 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 SEC16BQ96JE7 1060 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 OSBPL2Q9H1P3 480 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 KBTBD4Q9NVX7 518 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 DNAJB12Q9NXW2 375 aaKnown RBP7.33□□□□□ -1.24
C11orf54-212ENST00000533154 PPP4R2Q9NY27 417 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 CNTN3Q9P232 1028 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
C11orf54-212ENST00000533154 AKNAQ7Z591 1439 aa7.33□□□□□ -1.24
C11orf54-212ENST00000533154 PCF11O94913 1555 aaKnown RBP7.33□□□□□ -1.24
C11orf54-212ENST00000533154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.32□□□□□ -1.24
C11orf54-212ENST00000533154 RIMS1Q86UR5 1692 aaKnown RBP7.32□□□□□ -1.24
C11orf54-212ENST00000533154 DENND4BO75064 1496 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms