RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CIAPIN1Q6FI81 312 aa22.04■■□□□ 1.12
SMPD1-208ENST00000533123 SBF1O95248 1867 aa22.04■■□□□ 1.12
SMPD1-208ENST00000533123 FZD9O00144 591 aa22.04■■□□□ 1.12
SMPD1-208ENST00000533123 HSP90AA1P07900 732 aaKnown RBP22.04■■□□□ 1.12
SMPD1-208ENST00000533123 PRKAB2O43741 272 aa22.03■■□□□ 1.12
SMPD1-208ENST00000533123 NECTIN1Q15223 517 aa22.03■■□□□ 1.12
SMPD1-208ENST00000533123 SLF2Q8IX21 1173 aa22.03■■□□□ 1.12
SMPD1-208ENST00000533123 FAM163AQ96GL9 167 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-208ENST00000533123 DSCC1Q9BVC3 393 aa22.03■■□□□ 1.12
SMPD1-208ENST00000533123 APPP05067 770 aa22.02■■□□□ 1.12
SMPD1-208ENST00000533123 DDIT3P35638 169 aa22.02■■□□□ 1.12
SMPD1-208ENST00000533123 EIF6P56537 245 aaKnown RBP22.02■■□□□ 1.12
SMPD1-208ENST00000533123 SLC4A4Q9Y6R1 1079 aa22.02■■□□□ 1.12
SMPD1-208ENST00000533123 MYO3BQ8WXR4 1341 aa22.02■■□□□ 1.12
SMPD1-208ENST00000533123 BTDP43251 543 aa22.02■■□□□ 1.11
SMPD1-208ENST00000533123 TNIP1Q15025 636 aa22.02■■□□□ 1.11
SMPD1-208ENST00000533123 GMLQ99445 158 aa22.02■■□□□ 1.11
SMPD1-208ENST00000533123 DAGLAQ9Y4D2 1042 aa22.02■■□□□ 1.11
SMPD1-208ENST00000533123 GAKO14976 1311 aa22.01■■□□□ 1.11
SMPD1-208ENST00000533123 GPR75-ASB3A0A0A6YYF3 556 aa22.01■■□□□ 1.11
SMPD1-208ENST00000533123 CREB3L3Q68CJ9 461 aa22.01■■□□□ 1.11
SMPD1-208ENST00000533123 SDR42E1Q8WUS8 393 aa22.01■■□□□ 1.11
SMPD1-208ENST00000533123 TEKT1Q969V4 418 aa22.01■■□□□ 1.11
SMPD1-208ENST00000533123 RNF181Q9P0P0 153 aa22.01■■□□□ 1.11
SMPD1-208ENST00000533123 BAG3O95817 575 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 CRKP46108 304 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 NFKBIBQ15653 356 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 ADCK5Q3MIX3 580 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 NOL8Q76FK4 1167 aaKnown RBP22■■□□□ 1.11
SMPD1-208ENST00000533123 KCNB2Q92953 911 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 NOL10Q9BSC4 688 aaKnown RBP22■■□□□ 1.11
SMPD1-208ENST00000533123 PCDHAC2Q9Y5I4 1007 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 PATL2C9JE40 543 aaKnown RBP22■■□□□ 1.11
SMPD1-208ENST00000533123 CPA1P15085 419 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 GJA3Q9Y6H8 435 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
SMPD1-208ENST00000533123 ZNF541Q9H0D2 1346 aa22■■□□□ 1.11
SMPD1-208ENST00000533123 GSG1L2A8MUP6 293 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 SLC27A2O14975 620 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 FGAP02671 866 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 GNAT2P19087 354 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 RBM5P52756 815 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMPD1-208ENST00000533123 PPP4CP60510 307 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 HHIPL2Q6UWX4 724 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 AGBL3Q8NEM8 1001 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 SH3RF3Q8TEJ3 882 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-208ENST00000533123 TAF6LQ9Y6J9 622 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 GRIN3BO60391 1043 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 C9orf131Q5VYM1 1079 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 CHMP5Q9NZZ3 219 aa21.99■■□□□ 1.11
SMPD1-208ENST00000533123 U3KPZ7 1027 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-208ENST00000533123 ADAMTSL1Q8N6G6 1762 aa21.98■■□□□ 1.11
SMPD1-208ENST00000533123 MRIQ9BWK5 157 aa21.98■■□□□ 1.11
SMPD1-208ENST00000533123 EPB41L4AQ9HCS5 686 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-208ENST00000533123 CASTP20810 708 aaKnown RBP21.98■■□□□ 1.11
SMPD1-208ENST00000533123 HDLBPQ00341 1268 aaKnown RBP21.98■■□□□ 1.11
SMPD1-208ENST00000533123 IFNL3Q8IZI9 196 aa21.98■■□□□ 1.11
SMPD1-208ENST00000533123 OGFOD1Q8N543 542 aa21.98■■□□□ 1.11
SMPD1-208ENST00000533123 JAKMIP1Q96N16 626 aaKnown RBP21.98■■□□□ 1.11
SMPD1-208ENST00000533123 SERPINA10Q9UK55 444 aa21.98■■□□□ 1.11
SMPD1-208ENST00000533123 USP17L8P0C7I0 530 aa21.97■■□□□ 1.11
SMPD1-208ENST00000533123 APOBEC3HQ6NTF7 200 aaKnown RBP21.97■■□□□ 1.11
SMPD1-208ENST00000533123 CRNKL1Q9BZJ0 848 aaKnown RBP21.97■■□□□ 1.11
SMPD1-208ENST00000533123 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-208ENST00000533123 RHBDL3P58872 404 aa21.96■■□□□ 1.11
SMPD1-208ENST00000533123 TMX3Q96JJ7 454 aa21.96■■□□□ 1.11
SMPD1-208ENST00000533123 ZDHHC15Q96MV8 337 aa21.96■■□□□ 1.11
SMPD1-208ENST00000533123 COL9A3Q14050 684 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-208ENST00000533123 SHTN1A0MZ66 631 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 CYP21A2P08686 494 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 CFAP100Q494V2 611 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 TTC14Q96N46 770 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 NAPBQ9H115 298 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 HDAC9Q9UKV0 1011 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 TDO2P48775 406 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 MCM2P49736 904 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 GMPSP49915 693 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-208ENST00000533123 NACAP1Q9BZK3 213 aa21.95■■□□□ 1.1
SMPD1-208ENST00000533123 PLCG2P16885 1265 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 HAND2P61296 217 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 TEX11Q8IYF3 940 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 TGFBRAP1Q8WUH2 860 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 USP40Q9NVE5 1235 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 CTNNA3Q9UI47 895 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 USP5P45974 858 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 RNF20Q5VTR2 975 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 CDC42EP5Q6NZY7 148 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 CERS3Q8IU89 383 aa21.94■■□□□ 1.1
SMPD1-208ENST00000533123 DCP1AQ9NPI6 582 aaPredicted RBP21.94■■□□□ 1.1
SMPD1-208ENST00000533123 RPAP1Q9BWH6 1393 aaPredicted RBP21.93■■□□□ 1.1
SMPD1-208ENST00000533123 RPS12P25398 132 aaKnown RBP21.93■■□□□ 1.1
SMPD1-208ENST00000533123 ALX1Q15699 326 aa21.93■■□□□ 1.1
SMPD1-208ENST00000533123 PRMT6Q96LA8 375 aaPredicted RBP21.93■■□□□ 1.1
SMPD1-208ENST00000533123 LARP6Q9BRS8 491 aaKnown RBP21.93■■□□□ 1.1
SMPD1-208ENST00000533123 ZSWIM6Q9HCJ5 1215 aa21.93■■□□□ 1.1
SMPD1-208ENST00000533123 AK2P54819 239 aa21.92■■□□□ 1.1
SMPD1-208ENST00000533123 GPC2Q8N158 579 aa21.92■■□□□ 1.1
SMPD1-208ENST00000533123 ATP8A2Q9NTI2 1148 aa21.92■■□□□ 1.1
SMPD1-208ENST00000533123 IMMTQ16891 758 aaKnown RBP21.92■■□□□ 1.1
SMPD1-208ENST00000533123 MAPKAPK5Q8IW41 473 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms