RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 RUFY2Q8WXA3 655 aa17.21■□□□□ 0.35
COL16A1-217ENST00000532877 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.35
COL16A1-217ENST00000532877 GAKO14976 1311 aa17.21■□□□□ 0.34
COL16A1-217ENST00000532877 GMPSP49915 693 aaPredicted RBP17.2■□□□□ 0.34
COL16A1-217ENST00000532877 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 ZNF589Q86UQ0 364 aaPredicted RBP17.2■□□□□ 0.34
COL16A1-217ENST00000532877 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 MIGA1Q8NAN2 632 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 DAGLAQ9Y4D2 1042 aa17.2■□□□□ 0.34
COL16A1-217ENST00000532877 TNRC18O15417 2968 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-217ENST00000532877 LDHCP07864 332 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
COL16A1-217ENST00000532877 CRKP46108 304 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 RGS19P49795 217 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 LBX1P52954 281 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
COL16A1-217ENST00000532877 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 FAM163AQ96GL9 167 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-217ENST00000532877 ABHD8Q96I13 439 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 TAF1DQ9H5J8 278 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-217ENST00000532877 SERPINA10Q9UK55 444 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 CCDC171Q6TFL3 1326 aa17.19■□□□□ 0.34
COL16A1-217ENST00000532877 MAGEB6P1A0A0J9YX57 407 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 TMEM88BA6NKF7 163 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 GPAA1O43292 621 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 MBD4O95243 580 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 OGFOD1Q8N543 542 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 DPF2Q92785 391 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 AIDAQ96BJ3 306 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 RIOK1Q9BRS2 568 aaKnown RBP17.18■□□□□ 0.34
COL16A1-217ENST00000532877 MRIQ9BWK5 157 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 AATFQ9NY61 560 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL16A1-217ENST00000532877 HDAC9Q9UKV0 1011 aa17.18■□□□□ 0.34
COL16A1-217ENST00000532877 GPR75-ASB3A0A0A6YYF3 556 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 SHTN1A0MZ66 631 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 BTDP43251 543 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 LCORLQ8N3X6 602 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 BACH2Q9BYV9 841 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 PCDH10Q9P2E7 1040 aa17.17■□□□□ 0.34
COL16A1-217ENST00000532877 TRPM7Q96QT4 1865 aa17.16■□□□□ 0.34
COL16A1-217ENST00000532877 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
COL16A1-217ENST00000532877 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
COL16A1-217ENST00000532877 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-217ENST00000532877 DYNLL1P63167 89 aaKnown RBP17.16■□□□□ 0.34
COL16A1-217ENST00000532877 CFAP100Q494V2 611 aa17.16■□□□□ 0.34
COL16A1-217ENST00000532877 MICALL2Q8IY33 904 aa17.16■□□□□ 0.34
COL16A1-217ENST00000532877 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
COL16A1-217ENST00000532877 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
COL16A1-217ENST00000532877 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
COL16A1-217ENST00000532877 ECM29Q5VYK3 1845 aa17.16■□□□□ 0.34
COL16A1-217ENST00000532877 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 SEC24BO95487 1268 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 BAG3O95817 575 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 MMP14P50281 582 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 RBM5P52756 815 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL16A1-217ENST00000532877 PPP4CP60510 307 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 APOBEC3HQ6NTF7 200 aaKnown RBP17.15■□□□□ 0.34
COL16A1-217ENST00000532877 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 GPRC5DQ9NZD1 345 aa17.15■□□□□ 0.34
COL16A1-217ENST00000532877 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
COL16A1-217ENST00000532877 FOCADQ5VW36 1801 aa17.14■□□□□ 0.34
COL16A1-217ENST00000532877 REC8O95072 547 aa17.14■□□□□ 0.33
COL16A1-217ENST00000532877 VPS53Q5VIR6 699 aa17.14■□□□□ 0.33
COL16A1-217ENST00000532877 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
COL16A1-217ENST00000532877 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
COL16A1-217ENST00000532877 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
COL16A1-217ENST00000532877 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 FOXP2O15409 715 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 PLCG2P16885 1265 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 RHBDL3P58872 404 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 KIAA1211Q6ZU35 1233 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 MTMR14Q8NCE2 650 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 NAV1Q8NEY1 1877 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
COL16A1-217ENST00000532877 H7C1D1 291 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 PRKAB2O43741 272 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
COL16A1-217ENST00000532877 EGFRP00533 1210 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 HSPD1P10809 573 aaKnown RBP17.12■□□□□ 0.33
COL16A1-217ENST00000532877 GNAT2P19087 354 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 PTH1RQ03431 593 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-217ENST00000532877 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-217ENST00000532877 CRNKL1Q9BZJ0 848 aaKnown RBP17.12■□□□□ 0.33
COL16A1-217ENST00000532877 SLC4A4Q9Y6R1 1079 aa17.12■□□□□ 0.33
COL16A1-217ENST00000532877 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
COL16A1-217ENST00000532877 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
COL16A1-217ENST00000532877 EPS15P42566 896 aa17.11■□□□□ 0.33
COL16A1-217ENST00000532877 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms