RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	ANKRD13A	Q8IZ07	590 aa		12.07	□□□□□ -0.48
PPFIA1-223	ENST00000532793	PUS3	Q9BZE2	481 aa	Known RBP	12.07	□□□□□ -0.48
PPFIA1-223	ENST00000532793	TMOD2	Q9NZR1	351 aa		12.07	□□□□□ -0.48
PPFIA1-223	ENST00000532793	FZD1	Q9UP38	647 aa		12.07	□□□□□ -0.48
PPFIA1-223	ENST00000532793	AK9	Q5TCS8	1911 aa		12.07	□□□□□ -0.48
PPFIA1-223	ENST00000532793	UTY	O14607	1347 aa		12.07	□□□□□ -0.48
PPFIA1-223	ENST00000532793	IFIT1	P09914	478 aa	Known RBP	12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	RASA3	Q14644	834 aa		12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	MRPL50	Q8N5N7	158 aa	Known RBP	12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	WNK4	Q96J92	1243 aa		12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	FAM84B	Q96KN1	310 aa	Predicted RBP	12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	ZNF70	Q9UC06	446 aa	Predicted RBP	12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	PCDHAC2	Q9Y5I4	1007 aa		12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	MAST3	O60307	1309 aa		12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	ZNF521	Q96K83	1311 aa		12.06	□□□□□ -0.48
PPFIA1-223	ENST00000532793	SSC5D	A1L4H1	1573 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	PDE8B	O95263	885 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	CRK	P46108	304 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	RABL6	Q3YEC7	729 aa	Predicted RBP	12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	DZIP1L	Q8IYY4	767 aa	Known RBP	12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	TEKT1	Q969V4	418 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	TDRD3	Q9H7E2	651 aa	Known RBP	12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	SMC4	Q9NTJ3	1288 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	HPS5	Q9UPZ3	1129 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	HDAC5	Q9UQL6	1122 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	RIPOR2	Q9Y4F9	1068 aa		12.05	□□□□□ -0.48
PPFIA1-223	ENST00000532793	TCP10L2	B9ZVM9	353 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	PUM3	Q15397	648 aa	Known RBP	12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	ALDH1L2	Q3SY69	923 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	LRRC24	Q50LG9	513 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	EFCAB3	Q8N7B9	438 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	SSH1	Q8WYL5	1049 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	HOOK2	Q96ED9	719 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	KAZALD1	Q96I82	304 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	CLMN	Q96JQ2	1002 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	CFHR5	Q9BXR6	569 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	CSAD	Q9Y600	493 aa		12.04	□□□□□ -0.48
PPFIA1-223	ENST00000532793	WDHD1	O75717	1129 aa	Predicted RBP	12.03	□□□□□ -0.48
PPFIA1-223	ENST00000532793	SLC5A1	P13866	664 aa		12.03	□□□□□ -0.48
PPFIA1-223	ENST00000532793	HDLBP	Q00341	1268 aa	Known RBP	12.03	□□□□□ -0.48
PPFIA1-223	ENST00000532793	ANKRD44	Q8N8A2	993 aa		12.03	□□□□□ -0.48
PPFIA1-223	ENST00000532793	ERO1A	Q96HE7	468 aa		12.03	□□□□□ -0.48
PPFIA1-223	ENST00000532793	ELP3	Q9H9T3	547 aa		12.03	□□□□□ -0.48
PPFIA1-223	ENST00000532793	USP2	O75604	605 aa	Predicted RBP	12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	UBTFL1	P0CB47	393 aa	Predicted RBP	12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	SLFN5	Q08AF3	891 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	FBXO33	Q7Z6M2	555 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	KLHDC4	Q8TBB5	520 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	OPTN	Q96CV9	577 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	USP44	Q9H0E7	712 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	TRIM17	Q9Y577	477 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	KIF16B	Q96L93	1317 aa		12.02	□□□□□ -0.49
PPFIA1-223	ENST00000532793	EYA2	O00167	538 aa		12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CT47B1	P0C2W7	299 aa	Predicted RBP	12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	BCAM	P50895	628 aa		12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	ARHGEF6	Q15052	776 aa		12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	LPIN2	Q92539	896 aa		12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	TMEM39B	Q9GZU3	492 aa		12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	GNL3L	Q9NVN8	582 aa	Known RBP	12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	SUGT1	Q9Y2Z0	365 aa		12.01	□□□□□ -0.49
PPFIA1-223	ENST00000532793	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	GTF2A2	P52657	109 aa		12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	MAP3K9	P80192	1104 aa		12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	DCAF15	Q66K64	600 aa		12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	VGLL2	Q8N8G2	317 aa		12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	WDR66	Q8TBY9	1149 aa		12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	API5	Q9BZZ5	524 aa	Known RBP	12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	AOX1	Q06278	1338 aa		12	□□□□□ -0.49
PPFIA1-223	ENST00000532793	PBX2	P40425	430 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CRHR2	Q13324	411 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	VGLL4	Q14135	290 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	TAF1C	Q15572	869 aa	Predicted RBP	11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	ZDHHC15	Q96MV8	337 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	SIL1	Q9H173	461 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	ZFYVE28	Q9HCC9	887 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CEP126	Q9P2H0	1117 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	FBXO3	Q9UK99	471 aa		11.99	□□□□□ -0.49
PPFIA1-223	ENST00000532793	MYH2	Q9UKX2	1941 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CCL15-CCL14	A0A0B4J2E2	113 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CACNB3	P54284	484 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	SP3	Q02447	781 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CCL15	Q16663	113 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	ATP2B3	Q16720	1220 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	INTS3	Q68E01	1043 aa	Known RBP	11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	HHIPL2	Q6UWX4	724 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	FAM83A	Q86UY5	434 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CDCA7L	Q96GN5	454 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	TEPSIN	Q96N21	525 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	WRNIP1	Q96S55	665 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	MRI	Q9BWK5	157 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	R3HDML	Q9H3Y0	253 aa		11.98	□□□□□ -0.49
PPFIA1-223	ENST00000532793	DOCK2	Q92608	1830 aa		11.97	□□□□□ -0.49
PPFIA1-223	ENST00000532793	TESPA1	A2RU30	521 aa	Predicted RBP	11.97	□□□□□ -0.49
PPFIA1-223	ENST00000532793	CIAO1	O76071	339 aa		11.97	□□□□□ -0.49
PPFIA1-223	ENST00000532793	LDHB	P07195	334 aa	Known RBP	11.97	□□□□□ -0.49
PPFIA1-223	ENST00000532793	FGFR2	P21802	821 aa		11.97	□□□□□ -0.49
PPFIA1-223	ENST00000532793	GJA5	P36382	358 aa		11.97	□□□□□ -0.49

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