RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ZBTB48P10074 688 aaPredicted RBP21.21■□□□□ 0.99
PHRF1-204ENST00000532550 INHBEP58166 350 aa21.21■□□□□ 0.99
PHRF1-204ENST00000532550 ERICH6Q7L0X2 663 aa21.21■□□□□ 0.99
PHRF1-204ENST00000532550 SPATA5Q8NB90 893 aa21.21■□□□□ 0.99
PHRF1-204ENST00000532550 WNK4Q96J92 1243 aa21.21■□□□□ 0.99
PHRF1-204ENST00000532550 HMG20BQ9P0W2 317 aa21.21■□□□□ 0.99
PHRF1-204ENST00000532550 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
PHRF1-204ENST00000532550 MANSC4A6NHS7 340 aaPredicted RBP21.2■□□□□ 0.98
PHRF1-204ENST00000532550 MAP3K9P80192 1104 aa21.2■□□□□ 0.98
PHRF1-204ENST00000532550 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
PHRF1-204ENST00000532550 CCDC158Q5M9N0 1113 aa21.2■□□□□ 0.98
PHRF1-204ENST00000532550 CEP85Q6P2H3 762 aa21.2■□□□□ 0.98
PHRF1-204ENST00000532550 FAM151AQ8WW52 585 aa21.2■□□□□ 0.98
PHRF1-204ENST00000532550 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
PHRF1-204ENST00000532550 ARID4AP29374 1257 aaPredicted RBP21.19■□□□□ 0.98
PHRF1-204ENST00000532550 ELP3Q9H9T3 547 aa21.19■□□□□ 0.98
PHRF1-204ENST00000532550 DDX19BQ9UMR2 479 aa21.19■□□□□ 0.98
PHRF1-204ENST00000532550 MYH2Q9UKX2 1941 aa21.18■□□□□ 0.98
PHRF1-204ENST00000532550 TBC1D8O95759 1140 aa21.18■□□□□ 0.98
PHRF1-204ENST00000532550 TCP10Q12799 353 aa21.18■□□□□ 0.98
PHRF1-204ENST00000532550 TTC39AQ5SRH9 613 aa21.18■□□□□ 0.98
PHRF1-204ENST00000532550 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
PHRF1-204ENST00000532550 COG6Q9Y2V7 657 aa21.18■□□□□ 0.98
PHRF1-204ENST00000532550 CSADQ9Y600 493 aa21.18■□□□□ 0.98
PHRF1-204ENST00000532550 AK9Q5TCS8 1911 aa21.17■□□□□ 0.98
PHRF1-204ENST00000532550 ALDH1A1P00352 501 aa21.17■□□□□ 0.98
PHRF1-204ENST00000532550 DCAF15Q66K64 600 aa21.17■□□□□ 0.98
PHRF1-204ENST00000532550 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.17■□□□□ 0.98
PHRF1-204ENST00000532550 FAM163AQ96GL9 167 aaPredicted RBP21.17■□□□□ 0.98
PHRF1-204ENST00000532550 GAKO14976 1311 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 LDHCP07864 332 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 MCAMP43121 646 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 MECOMQ03112 1051 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 NFIAQ12857 509 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 DGKZQ13574 1117 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 PI16Q6UXB8 463 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 TBC1D9Q6ZT07 1266 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.16■□□□□ 0.98
PHRF1-204ENST00000532550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
PHRF1-204ENST00000532550 OPTNQ96CV9 577 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 ABHD8Q96I13 439 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 RAI14Q9P0K7 980 aa21.16■□□□□ 0.98
PHRF1-204ENST00000532550 GSTO1P78417 241 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 VGLL4Q14135 290 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 HSP90AB4PQ58FF6 505 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 OTUD7BQ6GQQ9 843 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 MIGA2Q7L4E1 593 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 ERC1Q8IUD2 1116 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 RPAP2Q8IXW5 612 aaPredicted RBP21.15■□□□□ 0.98
PHRF1-204ENST00000532550 ZNF341Q9BYN7 854 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 LRP2BPQ9P2M1 347 aa21.15■□□□□ 0.98
PHRF1-204ENST00000532550 RPAP1Q9BWH6 1393 aaPredicted RBP21.14■□□□□ 0.98
PHRF1-204ENST00000532550 BTDP43251 543 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 IFNL1Q8IU54 200 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 WRNIP1Q96S55 665 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 MCOLN1Q9GZU1 580 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 CCDC8Q9H0W5 538 aaPredicted RBP21.14■□□□□ 0.97
PHRF1-204ENST00000532550 SNRKQ9NRH2 765 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 ZBTB40Q9NUA8 1239 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 FAM198AQ9UFP1 575 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 EXOC6BQ9Y2D4 811 aa21.14■□□□□ 0.97
PHRF1-204ENST00000532550 MROH7-TTC4A0A0A0MT08 1334 aa21.13■□□□□ 0.97
PHRF1-204ENST00000532550 GJA5P36382 358 aa21.13■□□□□ 0.97
PHRF1-204ENST00000532550 NSUN4Q96CB9 384 aaKnown RBP21.13■□□□□ 0.97
PHRF1-204ENST00000532550 IDI2Q9BXS1 227 aa21.13■□□□□ 0.97
PHRF1-204ENST00000532550 GPR75-ASB3A0A0A6YYF3 556 aa21.12■□□□□ 0.97
PHRF1-204ENST00000532550 HMMRO75330 724 aa21.12■□□□□ 0.97
PHRF1-204ENST00000532550 ENTPD3O75355 529 aa21.12■□□□□ 0.97
PHRF1-204ENST00000532550 RGS3P49796 1198 aa21.12■□□□□ 0.97
PHRF1-204ENST00000532550 PDE3AQ14432 1141 aa21.12■□□□□ 0.97
PHRF1-204ENST00000532550 ZKSCAN4Q969J2 545 aaPredicted RBP21.12■□□□□ 0.97
PHRF1-204ENST00000532550 EAF2Q96CJ1 260 aaPredicted RBP21.12■□□□□ 0.97
PHRF1-204ENST00000532550 ZNF512BQ96KM6 892 aaPredicted RBP21.12■□□□□ 0.97
PHRF1-204ENST00000532550 GPR25O00155 361 aa21.11■□□□□ 0.97
PHRF1-204ENST00000532550 ERO1BQ86YB8 467 aa21.11■□□□□ 0.97
PHRF1-204ENST00000532550 ZSCAN29Q8IWY8 852 aaPredicted RBP21.11■□□□□ 0.97
PHRF1-204ENST00000532550 ZFPM1Q8IX07 1006 aa21.11■□□□□ 0.97
PHRF1-204ENST00000532550 OTUD5Q96G74 571 aa21.11■□□□□ 0.97
PHRF1-204ENST00000532550 CFHR5Q9BXR6 569 aa21.11■□□□□ 0.97
PHRF1-204ENST00000532550 DBNLQ9UJU6 430 aaKnown RBP21.11■□□□□ 0.97
PHRF1-204ENST00000532550 TESPA1A2RU30 521 aaPredicted RBP21.1■□□□□ 0.97
PHRF1-204ENST00000532550 IGF2BP3O00425 579 aaKnown RBP eCLIP21.1■□□□□ 0.97
PHRF1-204ENST00000532550 GTF2A2P52657 109 aa21.1■□□□□ 0.97
PHRF1-204ENST00000532550 NOM1Q5C9Z4 860 aaKnown RBP21.1■□□□□ 0.97
PHRF1-204ENST00000532550 ZNF384Q8TF68 577 aa21.1■□□□□ 0.97
PHRF1-204ENST00000532550 ZNF296Q8WUU4 475 aaPredicted RBP21.1■□□□□ 0.97
PHRF1-204ENST00000532550 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
PHRF1-204ENST00000532550 OTOFQ9HC10 1997 aa21.1■□□□□ 0.97
PHRF1-204ENST00000532550 SPDYE5A6NIY4 337 aa21.09■□□□□ 0.97
PHRF1-204ENST00000532550 MAP4K4O95819 1239 aaPredicted RBP21.09■□□□□ 0.97
PHRF1-204ENST00000532550 PICALMQ13492 652 aa21.09■□□□□ 0.97
PHRF1-204ENST00000532550 CTU1Q7Z7A3 348 aaKnown RBP21.09■□□□□ 0.97
PHRF1-204ENST00000532550 AACSQ86V21 672 aa21.09■□□□□ 0.97
PHRF1-204ENST00000532550 MS4A4AQ96JQ5 239 aa21.09■□□□□ 0.97
PHRF1-204ENST00000532550 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
PHRF1-204ENST00000532550 TLR7Q9NYK1 1049 aaKnown RBP21.09■□□□□ 0.97
PHRF1-204ENST00000532550 SNCAIPQ9Y6H5 919 aa21.09■□□□□ 0.97
PHRF1-204ENST00000532550 CCDC85CA6NKD9 419 aa21.08■□□□□ 0.97
PHRF1-204ENST00000532550 WDHD1O75717 1129 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms