RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 NSUN4Q96CB9 384 aaKnown RBP13.25□□□□□ -0.29
GPATCH4-216ENST00000531900 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
GPATCH4-216ENST00000531900 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
GPATCH4-216ENST00000531900 TLR7Q9NYK1 1049 aaKnown RBP13.25□□□□□ -0.29
GPATCH4-216ENST00000531900 DAGLAQ9Y4D2 1042 aa13.25□□□□□ -0.29
GPATCH4-216ENST00000531900 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 MAP4K4O95819 1239 aaPredicted RBP13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 TNNI2P48788 182 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 DIXDC1Q155Q3 683 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 SUPT20HL1Q3ZLR7 823 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 TTC39AQ5SRH9 613 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 AACSQ86V21 672 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 RASAL3Q86YV0 1011 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 ZNF384Q8TF68 577 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 ABHD8Q96I13 439 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 CSRNP1Q96S65 589 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 ABCF2Q9UG63 623 aa13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 MYO5AQ9Y4I1 1855 aaKnown RBP13.24□□□□□ -0.29
GPATCH4-216ENST00000531900 RPAP1Q9BWH6 1393 aaPredicted RBP13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 GPR75-ASB3A0A0A6YYF3 556 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 MECOMQ03112 1051 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 LDLRAD1Q5T700 205 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 CDC42EP5Q6NZY7 148 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 IDI2Q9BXS1 227 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 LRRCC1Q9C099 1032 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
GPATCH4-216ENST00000531900 TRPA1O75762 1119 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 LDHCP07864 332 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 GSTO1P78417 241 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 DZIP1Q86YF9 867 aaKnown RBP13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 RNF186Q9NXI6 227 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 TMOD2Q9NZR1 351 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 DOCK2Q92608 1830 aa13.22□□□□□ -0.29
GPATCH4-216ENST00000531900 RFX7Q2KHR2 1363 aa13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 PPP1R12BO60237 982 aaPredicted RBP13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 PPP4CP60510 307 aa13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 PRKG1Q13976 671 aa13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 NBPF12Q5TAG4 269 aaPredicted RBP13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 FAM151AQ8WW52 585 aa13.21□□□□□ -0.29
GPATCH4-216ENST00000531900 MAST2Q6P0Q8 1798 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 ENTPD3O75355 529 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 ATP5JP18859 108 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 ZAP70P43403 619 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 RHBDL3P58872 404 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 DGKZQ13574 1117 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 TMEM39BQ9GZU3 492 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 LRP2BPQ9P2M1 347 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 CASP8AP2Q9UKL3 1982 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 LAMB1P07942 1786 aa13.2□□□□□ -0.3
GPATCH4-216ENST00000531900 CCDC85CA6NKD9 419 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 SREBF2Q12772 1141 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 NFIAQ12857 509 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 HOOK2Q96ED9 719 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 SUPT16HQ9Y5B9 1047 aaKnown RBP13.19□□□□□ -0.3
GPATCH4-216ENST00000531900 APBB1O00213 710 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 BTDP43251 543 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 TM4SF4P48230 202 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 CACNB3P54284 484 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 SLC10A4Q96EP9 437 aa13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
GPATCH4-216ENST00000531900 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 NAA16Q6N069 864 aaPredicted RBP13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 ATRNL1Q5VV63 1379 aa13.17□□□□□ -0.3
GPATCH4-216ENST00000531900 CDK5RAP2Q96SN8 1893 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 BAG3O95817 575 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 PLCG2P16885 1265 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 RGS3P49796 1198 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 INHBEP58166 350 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 MAP3K12Q12852 859 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms