RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 C3P01024 1663 aa13□□□□□ -0.33
NXF1-211ENST00000531709 BTBD18B2RXH4 712 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 SCARF1Q14162 830 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 CTIFO43310 598 aaKnown RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 HSP90B2PQ58FF3 399 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 H7C1W4 665 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 FDPSP14324 419 aaKnown RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 STAMQ92783 540 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 NPHP4O75161 1426 aaPredicted RBP12.99□□□□□ -0.33
NXF1-211ENST00000531709 UTYO14607 1347 aa12.99□□□□□ -0.33
NXF1-211ENST00000531709 CCDC196A0A1B0GTZ2 297 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 KIF5CO60282 957 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 IPO7O95373 1038 aaKnown RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 RBM6P78332 1123 aaKnown RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 MCM6Q14566 821 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 NBPF14Q5TI25 921 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 NBPF10Q6P3W6 841 aaKnown RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 NBPF15Q8N660 670 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 CEP131Q9UPN4 1083 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 KIF28PB7ZC32 967 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 CCZ1BP86790 482 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 CCZ1P86791 482 aaPredicted RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 FOXO4P98177 505 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 SLC39A14Q15043 492 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 UTP14CQ5TAP6 766 aaKnown RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 SLC5A1P13866 664 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 RABL6Q3YEC7 729 aaPredicted RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 GRAMD1CQ8IYS0 662 aa12.98□□□□□ -0.33
NXF1-211ENST00000531709 DDX41Q9UJV9 622 aaKnown RBP12.98□□□□□ -0.33
NXF1-211ENST00000531709 PXDNQ92626 1479 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 ARMCX5Q6P1M9 558 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 RBM43Q6ZSC3 357 aaKnown RBP12.97□□□□□ -0.33
NXF1-211ENST00000531709 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 NUP88Q99567 741 aaPredicted RBP12.97□□□□□ -0.33
NXF1-211ENST00000531709 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 MON2Q7Z3U7 1717 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
NXF1-211ENST00000531709 LONRF3Q496Y0 759 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 ENGASEQ8NFI3 743 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 PRDM4Q9UKN5 801 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 DENND2AQ9ULE3 1009 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 SNAP23O00161 211 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 GREM2Q9H772 168 aa12.97□□□□□ -0.33
NXF1-211ENST00000531709 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
NXF1-211ENST00000531709 E4F1Q66K89 784 aaPredicted RBP12.96□□□□□ -0.33
NXF1-211ENST00000531709 APOA5Q6Q788 366 aa12.96□□□□□ -0.33
NXF1-211ENST00000531709 EPC1Q9H2F5 836 aa12.96□□□□□ -0.33
NXF1-211ENST00000531709 COL15A1P39059 1388 aa12.96□□□□□ -0.33
NXF1-211ENST00000531709 N4BP3O15049 544 aa12.96□□□□□ -0.33
NXF1-211ENST00000531709 IL2RBP14784 551 aa12.96□□□□□ -0.33
NXF1-211ENST00000531709 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
NXF1-211ENST00000531709 TMEM232C9JQI7 657 aa12.96□□□□□ -0.34
NXF1-211ENST00000531709 COBLO75128 1261 aa12.96□□□□□ -0.34
NXF1-211ENST00000531709 PRDM1O75626 825 aa12.96□□□□□ -0.34
NXF1-211ENST00000531709 SEC31AO94979 1220 aaKnown RBP12.96□□□□□ -0.34
NXF1-211ENST00000531709 PHKA1P46020 1223 aa12.96□□□□□ -0.34
NXF1-211ENST00000531709 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.34
NXF1-211ENST00000531709 CAGE1Q8TC20 777 aa12.96□□□□□ -0.34
NXF1-211ENST00000531709 CUTAO60888 179 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 CCT6AP40227 531 aaKnown RBP12.95□□□□□ -0.34
NXF1-211ENST00000531709 POSTNQ15063 836 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 JAKMIP3Q5VZ66 844 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 DPF2Q92785 391 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 GPR108Q9NPR9 543 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 MAPK8IP1Q9UQF2 711 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 UQCRFS1P1P0C7P4 283 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 CYP7A1P22680 504 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 LMAN1P49257 510 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 KRBA2Q6ZNG9 492 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 KRT23Q9C075 422 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 ARHGAP6O43182 974 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 PDE6AP16499 860 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 TMEM87BQ96K49 555 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 NCAPD2Q15021 1401 aa12.95□□□□□ -0.34
NXF1-211ENST00000531709 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
NXF1-211ENST00000531709 CCDC175P0C221 793 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 ZNF569Q5MCW4 686 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 PPP2R2CQ9Y2T4 447 aa12.94□□□□□ -0.34
NXF1-211ENST00000531709 GOLGA6L9A6NEM1 432 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms