RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 STK10O94804 968 aaKnown RBP16.4■□□□□ 0.22
LRRK1-207ENST00000531270 CASC4Q6P4E1 433 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 GBP7Q8N8V2 638 aaPredicted RBP16.4■□□□□ 0.22
LRRK1-207ENST00000531270 CCDC26Q8TAB7 109 aa16.4■□□□□ 0.22
LRRK1-207ENST00000531270 NOP56O00567 594 aaKnown RBP16.4■□□□□ 0.22
LRRK1-207ENST00000531270 FBXO31Q5XUX0 539 aaPredicted RBP16.4■□□□□ 0.22
LRRK1-207ENST00000531270 IGHDP01880 384 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 ERCC6LQ2NKX8 1250 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 TSGA10Q9BZW7 698 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 ATP11AP98196 1134 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 IGSF3O75054 1194 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 TYRO3Q06418 890 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 RSRC1Q96IZ7 334 aaKnown RBP16.39■□□□□ 0.21
LRRK1-207ENST00000531270 CSRNP2Q9H175 543 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 KRT19P08727 400 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 PLCG2P16885 1265 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
LRRK1-207ENST00000531270 CCDC89Q8N998 374 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 SMTNP53814 917 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
LRRK1-207ENST00000531270 PTPDC1A2A3K4 754 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 RNF113AO15541 343 aaKnown RBP16.38■□□□□ 0.21
LRRK1-207ENST00000531270 PCK1P35558 622 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 ZNF365Q70YC5 407 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 ARHGEF2Q92974 986 aaKnown RBP16.38■□□□□ 0.21
LRRK1-207ENST00000531270 PDE1CQ14123 709 aaPredicted RBP16.38■□□□□ 0.21
LRRK1-207ENST00000531270 LIN9Q5TKA1 542 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 RTCBQ9Y3I0 505 aaKnown RBP16.38■□□□□ 0.21
LRRK1-207ENST00000531270 PPME1Q9Y570 386 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 GRM8O00222 908 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 LPXNO60711 386 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 MAPK8IP1Q9UQF2 711 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 DACT3Q96B18 629 aaPredicted RBP16.38■□□□□ 0.21
LRRK1-207ENST00000531270 IFT74Q96LB3 600 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 GNAT2P19087 354 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 ATP5DP30049 168 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 C10orf67Q8IYJ2 551 aa16.38■□□□□ 0.21
LRRK1-207ENST00000531270 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
LRRK1-207ENST00000531270 CCNT1O60563 726 aaKnown RBP16.37■□□□□ 0.21
LRRK1-207ENST00000531270 ARFGAP2Q8N6H7 521 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 VCX3BQ9H321 246 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 TXNDC9O14530 226 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
LRRK1-207ENST00000531270 BSPRYQ5W0U4 402 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 VPS16Q9H269 839 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 ANKFY1Q9P2R3 1169 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 PDE4DQ08499 809 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 DDB1Q16531 1140 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 AFAP1L2Q8N4X5 818 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 NSMCE1Q8WV22 266 aa16.37■□□□□ 0.21
LRRK1-207ENST00000531270 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
LRRK1-207ENST00000531270 NOP9Q86U38 636 aaKnown RBP16.36■□□□□ 0.21
LRRK1-207ENST00000531270 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 EYA3Q99504 573 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 NCAPH2Q6IBW4 605 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 ZNF710Q8N1W2 664 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 PDE1AP54750 535 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 ASIC2Q16515 512 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 TFCP2Q12800 502 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 IQUBQ8NA54 791 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 IVNS1ABPQ9Y6Y0 642 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 SPDYE16A6NNV3 312 aaPredicted RBP16.36■□□□□ 0.21
LRRK1-207ENST00000531270 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 CACNA2D3Q8IZS8 1091 aa16.36■□□□□ 0.21
LRRK1-207ENST00000531270 UTP11Q9Y3A2 253 aaKnown RBP16.36■□□□□ 0.21
LRRK1-207ENST00000531270 ZBTB24O43167 697 aaPredicted RBP16.35■□□□□ 0.21
LRRK1-207ENST00000531270 TBC1D7Q9P0N9 293 aa16.35■□□□□ 0.21
LRRK1-207ENST00000531270 ACEP12821 1306 aa16.35■□□□□ 0.21
LRRK1-207ENST00000531270 LONRF3Q496Y0 759 aa16.35■□□□□ 0.21
LRRK1-207ENST00000531270 MCUR1Q96AQ8 359 aa16.35■□□□□ 0.21
LRRK1-207ENST00000531270 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
LRRK1-207ENST00000531270 AKR1B15C9JRZ8 316 aaPredicted RBP16.35■□□□□ 0.21
LRRK1-207ENST00000531270 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
LRRK1-207ENST00000531270 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 NUCB1Q02818 461 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 SH2D4BQ5SQS7 431 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 LRRC43Q8N309 656 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
LRRK1-207ENST00000531270 ASIC3Q9UHC3 531 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 A0A1B0GVL5 298 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 CALUO43852 315 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-207ENST00000531270 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 PIK3AP1Q6ZUJ8 805 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 CETN3O15182 167 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 ABL1P00519 1130 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 DCUN1D2Q6PH85 259 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 BAG1Q99933 345 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-207ENST00000531270 BEGAINQ9BUH8 593 aa16.34■□□□□ 0.21
LRRK1-207ENST00000531270 TXKP42681 527 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 TBC1D8BQ0IIM8 1120 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 HHATQ5VTY9 493 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 SH2D4AQ9H788 454 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 EPRSP07814 1512 aaKnown RBP16.33■□□□□ 0.21
LRRK1-207ENST00000531270 ARHGEF35A5YM69 484 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 MBD4O95243 580 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms