RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 C1orf115Q9H7X2 142 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 PSME4Q14997 1843 aa13.5□□□□□ -0.25
CAPN1-221ENST00000531068 LDHCP07864 332 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-221ENST00000531068 GSTO1P78417 241 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
CAPN1-221ENST00000531068 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 TNNI3KQ59H18 835 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 DCAF15Q66K64 600 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 CDC42EP5Q6NZY7 148 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 HMG20BQ9P0W2 317 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-221ENST00000531068 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 CSADQ9Y600 493 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 FPGT-TNNI3KV9GXZ4 949 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 PAPPA2Q9BXP8 1791 aa13.49□□□□□ -0.25
CAPN1-221ENST00000531068 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
CAPN1-221ENST00000531068 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
CAPN1-221ENST00000531068 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-221ENST00000531068 CLMNQ96JQ2 1002 aa13.48□□□□□ -0.25
CAPN1-221ENST00000531068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-221ENST00000531068 IGSF3O75054 1194 aa13.47□□□□□ -0.25
CAPN1-221ENST00000531068 HMMRO75330 724 aa13.47□□□□□ -0.25
CAPN1-221ENST00000531068 MAP4K4O95819 1239 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-221ENST00000531068 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
CAPN1-221ENST00000531068 WNK4Q96J92 1243 aa13.47□□□□□ -0.25
CAPN1-221ENST00000531068 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-221ENST00000531068 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
CAPN1-221ENST00000531068 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
CAPN1-221ENST00000531068 GAKO14976 1311 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 ENTPD3O75355 529 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 CAPN15O75808 1086 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 MECOMQ03112 1051 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.46□□□□□ -0.25
CAPN1-221ENST00000531068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
CAPN1-221ENST00000531068 IDI2Q9BXS1 227 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 RAI14Q9P0K7 980 aa13.46□□□□□ -0.25
CAPN1-221ENST00000531068 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.26
CAPN1-221ENST00000531068 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 TBC1D8O95759 1140 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 TCP10Q12799 353 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 NOM1Q5C9Z4 860 aaKnown RBP13.45□□□□□ -0.26
CAPN1-221ENST00000531068 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 ABHD8Q96I13 439 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 DBNDD2Q9BQY9 259 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 CFHR5Q9BXR6 569 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
CAPN1-221ENST00000531068 MCAMP43121 646 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 BTDP43251 543 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 NFIAQ12857 509 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 DGKZQ13574 1117 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 VGLL4Q14135 290 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 TBC1D9Q6ZT07 1266 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 NSUN4Q96CB9 384 aaKnown RBP13.44□□□□□ -0.26
CAPN1-221ENST00000531068 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 NOL10Q9BSC4 688 aaKnown RBP13.44□□□□□ -0.26
CAPN1-221ENST00000531068 FAM198AQ9UFP1 575 aa13.44□□□□□ -0.26
CAPN1-221ENST00000531068 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-221ENST00000531068 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 GPR25O00155 361 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 BAG3O95817 575 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 RGS3P49796 1198 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 GTF2A2P52657 109 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 PI16Q6UXB8 463 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 EAF2Q96CJ1 260 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 CCDC8Q9H0W5 538 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
CAPN1-221ENST00000531068 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-221ENST00000531068 SPDYE5A6NIY4 337 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 RAB11FIP3O75154 756 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 WDHD1O75717 1129 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-221ENST00000531068 GJA5P36382 358 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-221ENST00000531068 CTU1Q7Z7A3 348 aaKnown RBP13.42□□□□□ -0.26
CAPN1-221ENST00000531068 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 ZNF112Q9UJU3 913 aa13.42□□□□□ -0.26
CAPN1-221ENST00000531068 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms