RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 BCRP11274 1271 aa13.54□□□□□ -0.24
TM9SF1-210ENST00000530563 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
TM9SF1-210ENST00000530563 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
TM9SF1-210ENST00000530563 PRKCZQ05513 592 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 GPAT2Q6NUI2 795 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 MIGA2Q7L4E1 593 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 RAET1EQ8TD07 263 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 U2AF1L4Q8WU68 220 aaKnown RBP13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 TEKT1Q969V4 418 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 HTATIP2Q9BUP3 242 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 RNF208Q9H0X6 261 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 MYPNQ86TC9 1320 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 DNAH12Q6ZR08 3092 aa13.53□□□□□ -0.24
TM9SF1-210ENST00000530563 A0A1W2PPC1 479 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 FMNL1O95466 1100 aaPredicted RBP13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 HOXD10P28358 340 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 VGLL2Q8N8G2 317 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 LRCH3Q96II8 777 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 GABRQQ9UN88 632 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 CACNA1FO60840 1977 aa13.52□□□□□ -0.25
TM9SF1-210ENST00000530563 SPTBN5Q9NRC6 3674 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 SGPL1O95470 568 aa13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 HOOK2Q96ED9 719 aa13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 EYSQ5T1H1 3165 aa13.51□□□□□ -0.25
TM9SF1-210ENST00000530563 BCAMP50895 628 aa13.5□□□□□ -0.25
TM9SF1-210ENST00000530563 LRRC24Q50LG9 513 aa13.5□□□□□ -0.25
TM9SF1-210ENST00000530563 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-210ENST00000530563 DCAF15Q66K64 600 aa13.5□□□□□ -0.25
TM9SF1-210ENST00000530563 FAM151AQ8WW52 585 aa13.5□□□□□ -0.25
TM9SF1-210ENST00000530563 SUGT1Q9Y2Z0 365 aa13.5□□□□□ -0.25
TM9SF1-210ENST00000530563 UTYO14607 1347 aa13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 CYP2C8P10632 490 aa13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 UBXN2AP68543 259 aa13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 EXOSC9Q06265 439 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 RABL6Q3YEC7 729 aaPredicted RBP13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
TM9SF1-210ENST00000530563 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 CXCL11O14625 94 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 PDE8BO95263 885 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 FGFR2P21802 821 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 FCGRTP55899 365 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 NFIAQ12857 509 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 ZFPM1Q8IX07 1006 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 ANKRD44Q8N8A2 993 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 PAK6Q9NQU5 681 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
TM9SF1-210ENST00000530563 ATRNL1Q5VV63 1379 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 ADCY3O60266 1144 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 ELNP15502 786 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 FLT3LGP49771 235 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 CAVIN4Q5BKX8 364 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 CDC42EP5Q6NZY7 148 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 PARK7Q99497 189 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 GDF15Q99988 308 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 DAGLAQ9Y4D2 1042 aa13.47□□□□□ -0.25
TM9SF1-210ENST00000530563 PRUNE2Q8WUY3 3088 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 KIF16BQ96L93 1317 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 A0A0G2JLL6 359 aaPredicted RBP13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 EVI5O60447 810 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 INHAP05111 366 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 IRF5Q13568 498 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 PRRT2Q7Z6L0 340 aaPredicted RBP13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 DEFB118Q96PH6 123 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 SRCIN1Q9C0H9 1055 aa13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 BICC1Q9H694 974 aaKnown RBP13.46□□□□□ -0.25
TM9SF1-210ENST00000530563 MGAMO43451 1857 aa13.46□□□□□ -0.26
TM9SF1-210ENST00000530563 MAST3O60307 1309 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 ALPK3Q96L96 1907 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 CAPN2P17655 700 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 BMP8BP34820 402 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 TCP10Q12799 353 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 DIXDC1Q155Q3 683 aa13.45□□□□□ -0.26
TM9SF1-210ENST00000530563 METTL24Q5JXM2 366 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms