RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
SVIP-204ENST00000530199 RTCBQ9Y3I0 505 aaKnown RBP10.01□□□□□ -0.81
SVIP-204ENST00000530199 ADGRF5Q8IZF2 1346 aa10.01□□□□□ -0.81
SVIP-204ENST00000530199 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
SVIP-204ENST00000530199 CICQ96RK0 1608 aaPredicted RBP10□□□□□ -0.81
SVIP-204ENST00000530199 NHSQ6T4R5 1651 aa10□□□□□ -0.81
SVIP-204ENST00000530199 EIF1AYO14602 144 aaKnown RBP10□□□□□ -0.81
SVIP-204ENST00000530199 RGS19P49795 217 aa10□□□□□ -0.81
SVIP-204ENST00000530199 SMCPP49901 116 aaPredicted RBP10□□□□□ -0.81
SVIP-204ENST00000530199 CTC1Q2NKJ3 1217 aa10□□□□□ -0.81
SVIP-204ENST00000530199 FBF1Q8TES7 1133 aa10□□□□□ -0.81
SVIP-204ENST00000530199 CFHR5Q9BXR6 569 aa10□□□□□ -0.81
SVIP-204ENST00000530199 DNAJC25Q9H1X3 360 aa10□□□□□ -0.81
SVIP-204ENST00000530199 MRS2Q9HD23 443 aa10□□□□□ -0.81
SVIP-204ENST00000530199 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
SVIP-204ENST00000530199 FNDC3AQ9Y2H6 1198 aaKnown RBP10□□□□□ -0.81
SVIP-204ENST00000530199 SORBS3O60504 671 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 ITGAEP38570 1179 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 PSMD2Q13200 908 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 XKR5Q6UX68 686 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 ZFP42Q96MM3 310 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 CRISPLD1Q9H336 500 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 PRDM10Q9NQV6 1147 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 KCNMB2Q9Y691 235 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 PRR36Q9H6K5 1346 aa9.99□□□□□ -0.81
SVIP-204ENST00000530199 WNK3Q9BYP7 1800 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 TNFRSF21O75509 655 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 MLLT1Q03111 559 aaPredicted RBP9.98□□□□□ -0.81
SVIP-204ENST00000530199 TRIP4Q15650 581 aaPredicted RBP9.98□□□□□ -0.81
SVIP-204ENST00000530199 LDLRAD1Q5T700 205 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
SVIP-204ENST00000530199 NGDNQ8NEJ9 315 aaKnown RBP9.98□□□□□ -0.81
SVIP-204ENST00000530199 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 DYRK1BQ9Y463 629 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 KIAA1210Q9ULL0 1709 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 C10orf71Q711Q0 1435 aa9.98□□□□□ -0.81
SVIP-204ENST00000530199 IGSF3O75054 1194 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 CPNE3O75131 537 aaKnown RBP9.97□□□□□ -0.81
SVIP-204ENST00000530199 GNA15P30679 374 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 TYRO3Q06418 890 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
SVIP-204ENST00000530199 GPAMQ9HCL2 828 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 USP19O94966 1318 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
SVIP-204ENST00000530199 DGAT1O75907 488 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 F11P03951 625 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 EPB42P16452 691 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
SVIP-204ENST00000530199 ZNF438Q7Z4V0 828 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 CEP63Q96MT8 703 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 PRAM1Q96QH2 718 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 RUBCNLQ9H714 662 aa9.96□□□□□ -0.82
SVIP-204ENST00000530199 FOXD3Q9UJU5 478 aaPredicted RBP9.96□□□□□ -0.82
SVIP-204ENST00000530199 SCAMP3O14828 347 aaKnown RBP9.95□□□□□ -0.82
SVIP-204ENST00000530199 FAM50AQ14320 339 aaKnown RBP9.95□□□□□ -0.82
SVIP-204ENST00000530199 PKDCCQ504Y2 493 aa9.95□□□□□ -0.82
SVIP-204ENST00000530199 NLRP8Q86W28 1048 aa9.95□□□□□ -0.82
SVIP-204ENST00000530199 C16orf71Q8IYS4 520 aaPredicted RBP9.95□□□□□ -0.82
SVIP-204ENST00000530199 ELP3Q9H9T3 547 aa9.95□□□□□ -0.82
SVIP-204ENST00000530199 TFCP2L1Q9NZI6 479 aa9.95□□□□□ -0.82
SVIP-204ENST00000530199 VTI1BQ9UEU0 232 aa9.95□□□□□ -0.82
SVIP-204ENST00000530199 TUBGCP6Q96RT7 1819 aa9.95□□□□□ -0.82
SVIP-204ENST00000530199 AXIN1O15169 862 aa9.94□□□□□ -0.82
SVIP-204ENST00000530199 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.82
SVIP-204ENST00000530199 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
SVIP-204ENST00000530199 CRIPAKQ8N1N5 446 aa9.94□□□□□ -0.82
SVIP-204ENST00000530199 PGBD3Q8N328 593 aa9.94□□□□□ -0.82
SVIP-204ENST00000530199 SNX29Q8TEQ0 813 aa9.94□□□□□ -0.82
SVIP-204ENST00000530199 FRMD6Q96NE9 622 aa9.94□□□□□ -0.82
SVIP-204ENST00000530199 TRPM1Q7Z4N2 1603 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 USP6P35125 1406 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 EXOC5O00471 708 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 GCP02774 474 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 NUTM2GQ5VZR2 741 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 TMEM87AQ8NBN3 555 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 GAS2L1Q99501 681 aaPredicted RBP9.93□□□□□ -0.82
SVIP-204ENST00000530199 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 BTAF1O14981 1849 aa9.93□□□□□ -0.82
SVIP-204ENST00000530199 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 IGSF1Q8N6C5 1336 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 XYLBO75191 536 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 EGFRP00533 1210 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 HDLBPQ00341 1268 aaKnown RBP9.92□□□□□ -0.82
SVIP-204ENST00000530199 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.82
SVIP-204ENST00000530199 USPL1Q5W0Q7 1092 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 SMC1BQ8NDV3 1235 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 ABHD8Q96I13 439 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 HIRIP3Q9BW71 556 aaPredicted RBP9.92□□□□□ -0.82
SVIP-204ENST00000530199 C14orf93Q9H972 538 aaKnown RBP9.92□□□□□ -0.82
SVIP-204ENST00000530199 ZFYVE28Q9HCC9 887 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 BRD7Q9NPI1 651 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 C11orf16Q9NQ32 467 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 SPG7Q9UQ90 795 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 AK5Q9Y6K8 562 aa9.92□□□□□ -0.82
SVIP-204ENST00000530199 PXDNLA1KZ92 1463 aa9.91□□□□□ -0.82
SVIP-204ENST00000530199 PHACTR2O75167 634 aa9.91□□□□□ -0.82
SVIP-204ENST00000530199 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms