RNA–Protein interactions for RNA: ENST00000530164.5

RPS3-214, Transcript of ribosomal protein S3, humanhuman

TSL 1 (best) BASIC

Gene RPS3, Length 1,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-214ENST00000530164 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
RPS3-214ENST00000530164 SCAF8Q9UPN6 1271 aaKnown RBP11.32□□□□□ -0.6
RPS3-214ENST00000530164 TTC41PQ6P2S7 1318 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 PAPPA2Q9BXP8 1791 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 DDX60Q8IY21 1712 aaKnown RBP11.31□□□□□ -0.6
RPS3-214ENST00000530164 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
RPS3-214ENST00000530164 SREBF2Q12772 1141 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
RPS3-214ENST00000530164 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 RILPL2Q969X0 211 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 TTC14Q96N46 770 aa11.31□□□□□ -0.6
RPS3-214ENST00000530164 COL4A1P02462 1669 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 FKTNO75072 461 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 NF2P35240 595 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 MTX1Q13505 466 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
RPS3-214ENST00000530164 NBPF9Q3BBW0 867 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 KCNB2Q92953 911 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 XDHP47989 1333 aa11.3□□□□□ -0.6
RPS3-214ENST00000530164 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 MTERF4Q7Z6M4 381 aaKnown RBP11.29□□□□□ -0.6
RPS3-214ENST00000530164 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
RPS3-214ENST00000530164 ATP6V1DQ9Y5K8 247 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 WNT10BO00744 389 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 PDE8AO60658 829 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 ANKRD18AQ8IVF6 992 aa11.29□□□□□ -0.6
RPS3-214ENST00000530164 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
RPS3-214ENST00000530164 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
RPS3-214ENST00000530164 MMP14P50281 582 aa11.28□□□□□ -0.6
RPS3-214ENST00000530164 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
RPS3-214ENST00000530164 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
RPS3-214ENST00000530164 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
RPS3-214ENST00000530164 CCDC191Q8NCU4 936 aa11.28□□□□□ -0.6
RPS3-214ENST00000530164 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
RPS3-214ENST00000530164 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
RPS3-214ENST00000530164 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
RPS3-214ENST00000530164 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
RPS3-214ENST00000530164 SNX14Q9Y5W7 946 aa11.28□□□□□ -0.6
RPS3-214ENST00000530164 DYNC1I1O14576 645 aa11.27□□□□□ -0.6
RPS3-214ENST00000530164 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.6
RPS3-214ENST00000530164 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.6
RPS3-214ENST00000530164 UBE2HP62256 183 aa11.27□□□□□ -0.6
RPS3-214ENST00000530164 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.6
RPS3-214ENST00000530164 TSHZ3Q63HK5 1081 aa11.27□□□□□ -0.6
RPS3-214ENST00000530164 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.6
RPS3-214ENST00000530164 R3HDMLQ9H3Y0 253 aa11.27□□□□□ -0.6
RPS3-214ENST00000530164 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.6
RPS3-214ENST00000530164 MYO3BQ8WXR4 1341 aa11.27□□□□□ -0.61
RPS3-214ENST00000530164 SURF6O75683 361 aaKnown RBP11.27□□□□□ -0.61
RPS3-214ENST00000530164 INHBEP58166 350 aa11.27□□□□□ -0.61
RPS3-214ENST00000530164 DACT2Q5SW24 774 aa11.27□□□□□ -0.61
RPS3-214ENST00000530164 LDLRAD1Q5T700 205 aa11.27□□□□□ -0.61
RPS3-214ENST00000530164 STRIP1Q5VSL9 837 aa11.27□□□□□ -0.61
RPS3-214ENST00000530164 CCDC85AQ96PX6 553 aaPredicted RBP11.27□□□□□ -0.61
RPS3-214ENST00000530164 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
RPS3-214ENST00000530164 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
RPS3-214ENST00000530164 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
RPS3-214ENST00000530164 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
RPS3-214ENST00000530164 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
RPS3-214ENST00000530164 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
RPS3-214ENST00000530164 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 MYD88Q99836 296 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 MXD3Q9BW11 206 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 UPF3BQ9BZI7 483 aaKnown RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 BSDC1Q9NW68 430 aaPredicted RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 TRIM17Q9Y577 477 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 MED23Q9ULK4 1368 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 STX6O43752 255 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 F13A1P00488 732 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 TPM3P06753 285 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 PRKG1Q13976 671 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 APOBEC3FQ8IUX4 373 aaKnown RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 IL25Q9H293 177 aa11.25□□□□□ -0.61
RPS3-214ENST00000530164 R3HCC1Q9Y3T6 440 aaKnown RBP11.25□□□□□ -0.61
RPS3-214ENST00000530164 CCDC171Q6TFL3 1326 aa11.24□□□□□ -0.61
RPS3-214ENST00000530164 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
RPS3-214ENST00000530164 MANSC4A6NHS7 340 aaPredicted RBP11.24□□□□□ -0.61
RPS3-214ENST00000530164 HIP1O00291 1037 aa11.24□□□□□ -0.61
RPS3-214ENST00000530164 SRGAP3O43295 1099 aa11.24□□□□□ -0.61
RPS3-214ENST00000530164 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
RPS3-214ENST00000530164 AK2P54819 239 aa11.24□□□□□ -0.61
RPS3-214ENST00000530164 OTOP1Q7RTM1 612 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms