RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 SSFA2P28290 1259 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 BRDTQ58F21 947 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 LRSAM1Q6UWE0 723 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 CCDC117Q8IWD4 279 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 NIM1KQ8IY84 436 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 NLGN1Q8N2Q7 840 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 KIAA1524Q8TCG1 905 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 RBM8AQ9Y5S9 174 aaKnown RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 RTL1A6NKG5 1358 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 ZNF165P49910 485 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 SNW1Q13573 536 aaKnown RBP9.58□□□□□ -0.88
CTNND1-225ENST00000530094 HS2ST1Q7LGA3 356 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 MPNDQ8N594 471 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 PAXBP1Q9Y5B6 917 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
CTNND1-225ENST00000530094 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 CA8P35219 290 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 RBM10P98175 930 aaKnown RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 PUM3Q15397 648 aaKnown RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 ATL3Q6DD88 541 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 SDSP20132 328 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 ASIC1P78348 528 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 CEP63Q96MT8 703 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 BCCIPQ9P287 314 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■■■■□ 21.2
CTNND1-225ENST00000530094 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 BRAPQ7Z569 592 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 PPP1R14CQ8TAE6 165 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 HELLSQ9NRZ9 838 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 HSF2BPO75031 334 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 KRT83P78385 493 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 JADE2Q9NQC1 790 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 PRKG1Q13976 671 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 EAPPQ56P03 285 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-225ENST00000530094 TMOD4Q9NZQ9 345 aa9.57□□□□□ -0.88
CTNND1-225ENST00000530094 JCADQ9P266 1359 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 CTR9Q6PD62 1173 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 NSRP1Q9H0G5 558 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 SAP30BPQ9UHR5 308 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 BIN1O00499 593 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 RPS8P62241 208 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 PLS1Q14651 629 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 Q6ZUG5 572 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 LRRC2Q9BYS8 371 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 TBC1D2Q9BYX2 928 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 SPHKAPQ2M3C7 1700 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 TACC1O75410 805 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 RPL13P26373 211 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 DHX37Q8IY37 1157 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 TCHPQ9BT92 498 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 IQCGQ9H095 443 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 ARHGEF10LQ9HCE6 1279 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 RIMS1Q86UR5 1692 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 PARP1P09874 1014 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 UBASH3AP57075 661 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 CCDC14Q49A88 953 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 MAATS1Q7Z4T9 603 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 ZNF354CQ86Y25 554 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 TEX11Q8IYF3 940 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 PIGBQ92521 554 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 PICK1Q9NRD5 415 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 BRPF3Q9ULD4 1205 aa9.56□□□□□ -0.88
CTNND1-225ENST00000530094 SETD1BQ9UPS6 1966 aaKnown RBP9.56□□□□□ -0.88
CTNND1-225ENST00000530094 DNA2P51530 1060 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 NMIQ13287 307 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-225ENST00000530094 KLHL40Q2TBA0 621 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 MRVI1Q9Y6F6 885 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 NEURL1BA8MQ27 555 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 SNX16P57768 344 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 XAGE2Q96GT9 111 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-225ENST00000530094 TCEANC2Q96MN5 208 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 CDC42BPGQ6DT37 1551 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 CAMSAP1Q5T5Y3 1602 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 DBNDD2Q9BQY9 259 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 USP25Q9UHP3 1055 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 ABCA6Q8N139 1617 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 CEP128Q6ZU80 1094 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 TBC1D32Q96NH3 1257 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 PRAMEF22A3QJZ6 481 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 TAF12Q16514 161 aa9.55□□□□□ -0.88
CTNND1-225ENST00000530094 UNC13BO14795 1591 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 ADCY5O95622 1261 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 CTSWP56202 376 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 MMRN2Q9H8L6 949 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 ZBTB40Q9NUA8 1239 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.88
CTNND1-225ENST00000530094 ARHGEF40Q8TER5 1519 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 MAP3K15Q6ZN16 1313 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 TNNI3KQ59H18 835 aa9.54□□□□□ -0.88
CTNND1-225ENST00000530094 PANK2Q9BZ23 570 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms