RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 CAPN2P17655 700 aa13.18□□□□□ -0.3
COPB1-207ENST00000529866 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
COPB1-207ENST00000529866 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
COPB1-207ENST00000529866 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
COPB1-207ENST00000529866 ZDHHC15Q96MV8 337 aa13.18□□□□□ -0.3
COPB1-207ENST00000529866 IL16Q14005 1332 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 EVI5O60447 810 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 CTGFP29279 349 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 PRKCZQ05513 592 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 MRIQ9BWK5 157 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
COPB1-207ENST00000529866 KCNH4Q9UQ05 1017 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 SUGT1Q9Y2Z0 365 aa13.17□□□□□ -0.3
COPB1-207ENST00000529866 ADGRA2Q96PE1 1338 aa13.16□□□□□ -0.3
COPB1-207ENST00000529866 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
COPB1-207ENST00000529866 F6X3S4 739 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 SGPL1O95470 568 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 INPP5BP32019 993 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 GRIK5Q16478 980 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.3
COPB1-207ENST00000529866 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
COPB1-207ENST00000529866 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
COPB1-207ENST00000529866 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
COPB1-207ENST00000529866 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
COPB1-207ENST00000529866 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
COPB1-207ENST00000529866 HHIPL2Q6UWX4 724 aa13.14□□□□□ -0.31
COPB1-207ENST00000529866 UNC93B1Q9H1C4 597 aa13.14□□□□□ -0.31
COPB1-207ENST00000529866 COL6A3P12111 3177 aa13.14□□□□□ -0.31
COPB1-207ENST00000529866 CXCL11O14625 94 aa13.13□□□□□ -0.31
COPB1-207ENST00000529866 ADCY3O60266 1144 aa13.13□□□□□ -0.31
COPB1-207ENST00000529866 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
COPB1-207ENST00000529866 TFRCP02786 760 aaKnown RBP13.13□□□□□ -0.31
COPB1-207ENST00000529866 BCRP11274 1271 aa13.13□□□□□ -0.31
COPB1-207ENST00000529866 NOL9Q5SY16 702 aaKnown RBP13.13□□□□□ -0.31
COPB1-207ENST00000529866 FAM151AQ8WW52 585 aa13.13□□□□□ -0.31
COPB1-207ENST00000529866 PUS3Q9BZE2 481 aaKnown RBP13.13□□□□□ -0.31
COPB1-207ENST00000529866 ZNF112Q9UJU3 913 aa13.13□□□□□ -0.31
COPB1-207ENST00000529866 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
COPB1-207ENST00000529866 INHAP05111 366 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 CYP2C8P10632 490 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 FASTKD5Q7L8L6 764 aaKnown RBP13.12□□□□□ -0.31
COPB1-207ENST00000529866 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 LRCH3Q96II8 777 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 SRCIN1Q9C0H9 1055 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
COPB1-207ENST00000529866 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 TNPO2O14787 897 aaKnown RBP13.11□□□□□ -0.31
COPB1-207ENST00000529866 VAMP4O75379 141 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 IFIT1P09914 478 aaKnown RBP13.11□□□□□ -0.31
COPB1-207ENST00000529866 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
COPB1-207ENST00000529866 FLT3LGP49771 235 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 BCAMP50895 628 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 IRF5Q13568 498 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 MOGSQ13724 837 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
COPB1-207ENST00000529866 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
COPB1-207ENST00000529866 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 DEFB118Q96PH6 123 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 STAP2Q9UGK3 403 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
COPB1-207ENST00000529866 PDE8BO95263 885 aa13.1□□□□□ -0.31
COPB1-207ENST00000529866 ELNP15502 786 aa13.1□□□□□ -0.31
COPB1-207ENST00000529866 TCP10Q12799 353 aa13.1□□□□□ -0.31
COPB1-207ENST00000529866 PUM3Q15397 648 aaKnown RBP13.1□□□□□ -0.31
COPB1-207ENST00000529866 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
COPB1-207ENST00000529866 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
COPB1-207ENST00000529866 PAK6Q9NQU5 681 aaPredicted RBP13.1□□□□□ -0.31
COPB1-207ENST00000529866 SLC45A1Q9Y2W3 748 aa13.1□□□□□ -0.31
COPB1-207ENST00000529866 A0A0G2JLL6 359 aaPredicted RBP13.09□□□□□ -0.31
COPB1-207ENST00000529866 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
COPB1-207ENST00000529866 PRRT2Q7Z6L0 340 aaPredicted RBP13.09□□□□□ -0.31
COPB1-207ENST00000529866 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
COPB1-207ENST00000529866 COA7Q96BR5 231 aa13.09□□□□□ -0.31
COPB1-207ENST00000529866 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
COPB1-207ENST00000529866 BMP8BP34820 402 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
COPB1-207ENST00000529866 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 CDC42EP5Q6NZY7 148 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 DEFB123Q8N688 67 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
COPB1-207ENST00000529866 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
COPB1-207ENST00000529866 DAGLAQ9Y4D2 1042 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 ZHX2Q9Y6X8 837 aa13.08□□□□□ -0.32
COPB1-207ENST00000529866 SLC5A1P13866 664 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 NFIAQ12857 509 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 RABL6Q3YEC7 729 aaPredicted RBP13.07□□□□□ -0.32
COPB1-207ENST00000529866 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms