RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CACNB3P54284 484 aa15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 GSTO1P78417 241 aa15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 HDAC1Q13547 482 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 SUPT20HL1Q3ZLR7 823 aa15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 USP40Q9NVE5 1235 aa15.48■□□□□ 0.07
CCDC90B-216ENST00000529856 MROH7-TTC4A0A0A0MT08 1334 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 WDR33Q9C0J8 1336 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 GPR75-ASB3A0A0A6YYF3 556 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 ECE1P42892 770 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 CYP4F22Q6NT55 531 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 MOB2Q70IA6 237 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 FAM83AQ86UY5 434 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 CAPNS2Q96L46 248 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 PIH1D3Q9NQM4 214 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
CCDC90B-216ENST00000529856 UBE2Q2LH0YL09 131 aa15.46■□□□□ 0.07
CCDC90B-216ENST00000529856 RGMBQ6NW40 437 aa15.46■□□□□ 0.07
CCDC90B-216ENST00000529856 PAXIP1Q6ZW49 1069 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-216ENST00000529856 TMEM39BQ9GZU3 492 aa15.46■□□□□ 0.07
CCDC90B-216ENST00000529856 ANTXR1Q9H6X2 564 aa15.46■□□□□ 0.07
CCDC90B-216ENST00000529856 NDUFB9Q9Y6M9 179 aa15.46■□□□□ 0.07
CCDC90B-216ENST00000529856 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.06
CCDC90B-216ENST00000529856 ATP5JP18859 108 aa15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 BTDP43251 543 aa15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 PRKG1Q13976 671 aa15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 TTLL12Q14166 644 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 NAA16Q6N069 864 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 ARMC9Q7Z3E5 817 aa15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 FAM151AQ8WW52 585 aa15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
CCDC90B-216ENST00000529856 PPP1R12BO60237 982 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 ZNF157P51786 506 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 NFIAQ12857 509 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 MAP3K11Q16584 847 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 CCDC102AQ96A19 550 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 IDI2Q9BXS1 227 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 FAM198AQ9UFP1 575 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 SSC5DA1L4H1 1573 aa15.44■□□□□ 0.06
CCDC90B-216ENST00000529856 USP2O75604 605 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 IDH1O75874 414 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 MAP4K4O95819 1239 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 RHBDL3P58872 404 aa15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 GRM1Q13255 1194 aa15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 LDLRAD1Q5T700 205 aa15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 HAUS7Q99871 368 aa15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 BOLA2Q9H3K6 86 aa15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 ANGEL1Q9UNK9 670 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 FZD1Q9UP38 647 aa15.43■□□□□ 0.06
CCDC90B-216ENST00000529856 FAM155AB1AL88 458 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 ENTPD3O75355 529 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 WDHD1O75717 1129 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 MAP2K2P36507 400 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 PPP4CP60510 307 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 TCP10Q12799 353 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 MAP3K12Q12852 859 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 TMED8Q6PL24 325 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 ADGRA1Q86SQ6 560 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 DNAJC2Q99543 621 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 ECHDC1Q9NTX5 307 aa15.42■□□□□ 0.06
CCDC90B-216ENST00000529856 RPAP1Q9BWH6 1393 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 UNCXA6NJT0 531 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 GOLIM4O00461 696 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 AOC2O75106 756 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 BAG3O95817 575 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 IGHDP01880 384 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 SLC10A3P09131 477 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 CYP7A1P22680 504 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 RGS3P49796 1198 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 ZFPM1Q8IX07 1006 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 MAST2Q6P0Q8 1798 aa15.41■□□□□ 0.06
CCDC90B-216ENST00000529856 DOCK2Q92608 1830 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 PCNTO95613 3336 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 PLCG2P16885 1265 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 IREB2P48200 963 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 NOGQ13253 232 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 RASAL3Q86YV0 1011 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 SMC5Q8IY18 1101 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 MAGEB6Q8N7X4 407 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 SH3RF3Q8TEJ3 882 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 GPATCH3Q96I76 525 aa15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 DDX4Q9NQI0 724 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 AATFQ9NY61 560 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC90B-216ENST00000529856 MAP2K1Q02750 393 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 TEX11Q8IYF3 940 aa15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 SLC10A4Q96EP9 437 aa15.39■□□□□ 0.05
CCDC90B-216ENST00000529856 ZIC5Q96T25 663 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms