RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 USP40Q9NVE5 1235 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 LRP2BPQ9P2M1 347 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 MROH7-TTC4A0A0A0MT08 1334 aa19.71■□□□□ 0.75
TSPAN4-218ENST00000529566 FAM155AB1AL88 458 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 NF2P35240 595 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 NFIAQ12857 509 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 SUPT20HL1Q3ZLR7 823 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 LDLRAD1Q5T700 205 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 RGMBQ6NW40 437 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 FZD1Q9UP38 647 aa19.7■□□□□ 0.74
TSPAN4-218ENST00000529566 IGSF3O75054 1194 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 ECE1P42892 770 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 BTDP43251 543 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 TNNI2P48788 182 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 RHBDL3P58872 404 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 GSTO1P78417 241 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 MAP3K11Q16584 847 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 BCL11AQ9H165 835 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 TMOD2Q9NZR1 351 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 FAM198AQ9UFP1 575 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 RFX7Q2KHR2 1363 aa19.69■□□□□ 0.74
TSPAN4-218ENST00000529566 AOC2O75106 756 aa19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 LDHCP07864 332 aa19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 ATP5JP18859 108 aa19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 PRKG1Q13976 671 aa19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 PAXIP1Q6ZW49 1069 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 IDI2Q9BXS1 227 aa19.68■□□□□ 0.74
TSPAN4-218ENST00000529566 MYO5AQ9Y4I1 1855 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 USP2O75604 605 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 ZNF157P51786 506 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 TTLL12Q14166 644 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 ARMC9Q7Z3E5 817 aa19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 ADGRA1Q86SQ6 560 aa19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 ZFPM1Q8IX07 1006 aa19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 FAM151AQ8WW52 585 aa19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 ZIC5Q96T25 663 aa19.67■□□□□ 0.74
TSPAN4-218ENST00000529566 THSD7BQ9C0I4 1608 aa19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 MAP2K2P36507 400 aa19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 GRM1Q13255 1194 aa19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 CCDC102AQ96A19 550 aa19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 RPAP1Q9BWH6 1393 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-218ENST00000529566 PPP1R12BO60237 982 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 SLC10A3P09131 477 aa19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 PPP4CP60510 307 aa19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 TCP10Q12799 353 aa19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 RASAL3Q86YV0 1011 aa19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 HAUS7Q99871 368 aa19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 DDX4Q9NQI0 724 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-218ENST00000529566 IDH1O75874 414 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-218ENST00000529566 MAP4K4O95819 1239 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-218ENST00000529566 IGHDP01880 384 aa19.64■□□□□ 0.73
TSPAN4-218ENST00000529566 RGS3P49796 1198 aa19.64■□□□□ 0.73
TSPAN4-218ENST00000529566 EDC3Q96F86 508 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-218ENST00000529566 WBP1LQ9NX94 342 aa19.64■□□□□ 0.73
TSPAN4-218ENST00000529566 UNCXA6NJT0 531 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 GOLIM4O00461 696 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 ENTPD3O75355 529 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 NOGQ13253 232 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 TTF1Q15361 905 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 SH3BP5LQ7L8J4 393 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 OTUD7AQ8TE49 926 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 GCC1Q96CN9 775 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 ECHDC1Q9NTX5 307 aa19.63■□□□□ 0.73
TSPAN4-218ENST00000529566 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 MAST2Q6P0Q8 1798 aa19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 CYP7A1P22680 504 aa19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 IRX6P78412 446 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 MAP3K12Q12852 859 aa19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 TMED8Q6PL24 325 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 MAGEB6Q8N7X4 407 aa19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 CLMNQ96JQ2 1002 aa19.62■□□□□ 0.73
TSPAN4-218ENST00000529566 ATRNL1Q5VV63 1379 aa19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 HSPA1AP0DMV8 641 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 HSPA1BP0DMV9 641 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 IREB2P48200 963 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 SMC5Q8IY18 1101 aa19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 RWDD1Q9H446 243 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 PAG1Q9NWQ8 432 aa19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 AATFQ9NY61 560 aaKnown RBP eCLIP19.61■□□□□ 0.73
TSPAN4-218ENST00000529566 SALL3Q9BXA9 1300 aa19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 TCRBV5S4A2TA0A5A2 114 aa19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 DDTLA6NHG4 134 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 BAG3O95817 575 aa19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 KIF23Q02241 960 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 MAP2K1Q02750 393 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 ANKRD45Q5TZF3 282 aa19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 TSHZ3Q63HK5 1081 aa19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.73
TSPAN4-218ENST00000529566 PDE6AP16499 860 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms