RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 TMOD2Q9NZR1 351 aa20.61■□□□□ 0.89
HIF3A-211ENST00000528563 ZAP70P43403 619 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 PRKG1Q13976 671 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 MAP3K11Q16584 847 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 ARMC9Q7Z3E5 817 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 USP40Q9NVE5 1235 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 WBP1LQ9NX94 342 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 LRP2BPQ9P2M1 347 aa20.6■□□□□ 0.89
HIF3A-211ENST00000528563 SSC5DA1L4H1 1573 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 GPR75-ASB3A0A0A6YYF3 556 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 PPP1R12BO60237 982 aaPredicted RBP20.59■□□□□ 0.89
HIF3A-211ENST00000528563 NOGQ13253 232 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 CDAN1Q8IWY9 1227 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 LRRCC1Q9C099 1032 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 RAI14Q9P0K7 980 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 FZD1Q9UP38 647 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 MYH2Q9UKX2 1941 aa20.59■□□□□ 0.89
HIF3A-211ENST00000528563 IGSF3O75054 1194 aa20.58■□□□□ 0.89
HIF3A-211ENST00000528563 USP2O75604 605 aaPredicted RBP20.58■□□□□ 0.89
HIF3A-211ENST00000528563 LDHCP07864 332 aa20.58■□□□□ 0.89
HIF3A-211ENST00000528563 IFIT2P09913 472 aaKnown RBP20.58■□□□□ 0.89
HIF3A-211ENST00000528563 HSPA1AP0DMV8 641 aaKnown RBP20.58■□□□□ 0.89
HIF3A-211ENST00000528563 HSPA1BP0DMV9 641 aaKnown RBP20.58■□□□□ 0.89
HIF3A-211ENST00000528563 GSTO1P78417 241 aa20.58■□□□□ 0.89
HIF3A-211ENST00000528563 MAP2K1Q02750 393 aaPredicted RBP20.58■□□□□ 0.89
HIF3A-211ENST00000528563 ZIC5Q96T25 663 aa20.58■□□□□ 0.89
HIF3A-211ENST00000528563 ANGEL1Q9UNK9 670 aaKnown RBP20.58■□□□□ 0.89
HIF3A-211ENST00000528563 MROH7-TTC4A0A0A0MT08 1334 aa20.58■□□□□ 0.88
HIF3A-211ENST00000528563 FAM151AQ8WW52 585 aa20.57■□□□□ 0.88
HIF3A-211ENST00000528563 PIH1D3Q9NQM4 214 aaKnown RBP20.57■□□□□ 0.88
HIF3A-211ENST00000528563 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
HIF3A-211ENST00000528563 SLC10A3P09131 477 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 NFIAQ12857 509 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 IDI2Q9BXS1 227 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 FAM198AQ9UFP1 575 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 UNCXA6NJT0 531 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
HIF3A-211ENST00000528563 BTDP43251 543 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 AAMPQ13685 434 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 RASAL3Q86YV0 1011 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.56■□□□□ 0.88
HIF3A-211ENST00000528563 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
HIF3A-211ENST00000528563 THSD7BQ9C0I4 1608 aa20.55■□□□□ 0.88
HIF3A-211ENST00000528563 RHBDL3P58872 404 aa20.55■□□□□ 0.88
HIF3A-211ENST00000528563 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
HIF3A-211ENST00000528563 WDHD1O75717 1129 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-211ENST00000528563 MAP4K4O95819 1239 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-211ENST00000528563 KIF23Q02241 960 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-211ENST00000528563 TCP10Q12799 353 aa20.54■□□□□ 0.88
HIF3A-211ENST00000528563 NAA16Q6N069 864 aaPredicted RBP20.54■□□□□ 0.88
HIF3A-211ENST00000528563 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
HIF3A-211ENST00000528563 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
HIF3A-211ENST00000528563 ENTPD3O75355 529 aa20.53■□□□□ 0.88
HIF3A-211ENST00000528563 ATP5JP18859 108 aa20.53■□□□□ 0.88
HIF3A-211ENST00000528563 IREB2P48200 963 aaKnown RBP20.53■□□□□ 0.88
HIF3A-211ENST00000528563 SLC10A4Q96EP9 437 aa20.53■□□□□ 0.88
HIF3A-211ENST00000528563 RPAP1Q9BWH6 1393 aaPredicted RBP20.53■□□□□ 0.88
HIF3A-211ENST00000528563 FOXN1O15353 648 aa20.52■□□□□ 0.88
HIF3A-211ENST00000528563 RGS3P49796 1198 aa20.52■□□□□ 0.88
HIF3A-211ENST00000528563 HOOK2Q96ED9 719 aa20.52■□□□□ 0.88
HIF3A-211ENST00000528563 CLMNQ96JQ2 1002 aa20.52■□□□□ 0.88
HIF3A-211ENST00000528563 MYO5AQ9Y4I1 1855 aaKnown RBP20.51■□□□□ 0.87
HIF3A-211ENST00000528563 NPM3O75607 178 aaKnown RBP20.51■□□□□ 0.87
HIF3A-211ENST00000528563 PPP4CP60510 307 aa20.51■□□□□ 0.87
HIF3A-211ENST00000528563 HDAC1Q13547 482 aaPredicted RBP20.51■□□□□ 0.87
HIF3A-211ENST00000528563 ADGRA1Q86SQ6 560 aa20.51■□□□□ 0.87
HIF3A-211ENST00000528563 ANKRD13AQ8IZ07 590 aa20.51■□□□□ 0.87
HIF3A-211ENST00000528563 CSRNP1Q96S65 589 aa20.51■□□□□ 0.87
HIF3A-211ENST00000528563 DDX4Q9NQI0 724 aaKnown RBP20.51■□□□□ 0.87
HIF3A-211ENST00000528563 RFX7Q2KHR2 1363 aa20.51■□□□□ 0.87
HIF3A-211ENST00000528563 IDH1O75874 414 aaKnown RBP20.5■□□□□ 0.87
HIF3A-211ENST00000528563 TTF1Q15361 905 aaPredicted RBP20.5■□□□□ 0.87
HIF3A-211ENST00000528563 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.5■□□□□ 0.87
HIF3A-211ENST00000528563 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
HIF3A-211ENST00000528563 AIDAQ96BJ3 306 aa20.5■□□□□ 0.87
HIF3A-211ENST00000528563 MAP3K9P80192 1104 aa20.5■□□□□ 0.87
HIF3A-211ENST00000528563 SPRYD7Q5W111 196 aa20.5■□□□□ 0.87
HIF3A-211ENST00000528563 TMED8Q6PL24 325 aaPredicted RBP20.5■□□□□ 0.87
HIF3A-211ENST00000528563 SH3BP5LQ7L8J4 393 aa20.5■□□□□ 0.87
HIF3A-211ENST00000528563 BAG3O95817 575 aa20.49■□□□□ 0.87
HIF3A-211ENST00000528563 CYP7A1P22680 504 aa20.49■□□□□ 0.87
HIF3A-211ENST00000528563 MAP3K12Q12852 859 aa20.49■□□□□ 0.87
HIF3A-211ENST00000528563 MIGA2Q7L4E1 593 aa20.49■□□□□ 0.87
HIF3A-211ENST00000528563 REM2Q8IYK8 340 aaPredicted RBP20.49■□□□□ 0.87
HIF3A-211ENST00000528563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.49■□□□□ 0.87
HIF3A-211ENST00000528563 BEGAINQ9BUH8 593 aa20.49■□□□□ 0.87
HIF3A-211ENST00000528563 BOLA2Q9H3K6 86 aa20.49■□□□□ 0.87
HIF3A-211ENST00000528563 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
HIF3A-211ENST00000528563 DCAF15Q66K64 600 aa20.48■□□□□ 0.87
HIF3A-211ENST00000528563 SH3RF3Q8TEJ3 882 aaPredicted RBP20.48■□□□□ 0.87
HIF3A-211ENST00000528563 HAUS7Q99871 368 aa20.48■□□□□ 0.87
HIF3A-211ENST00000528563 NOL10Q9BSC4 688 aaKnown RBP20.48■□□□□ 0.87
HIF3A-211ENST00000528563 ECHDC1Q9NTX5 307 aa20.48■□□□□ 0.87
HIF3A-211ENST00000528563 AATFQ9NY61 560 aaKnown RBP eCLIP20.48■□□□□ 0.87
HIF3A-211ENST00000528563 GOLIM4O00461 696 aa20.47■□□□□ 0.87
HIF3A-211ENST00000528563 PLCG2P16885 1265 aa20.47■□□□□ 0.87
HIF3A-211ENST00000528563 MAP3K10Q02779 954 aa20.47■□□□□ 0.87
HIF3A-211ENST00000528563 MAGEB6Q8N7X4 407 aa20.47■□□□□ 0.87
HIF3A-211ENST00000528563 EDC3Q96F86 508 aaKnown RBP20.47■□□□□ 0.87
HIF3A-211ENST00000528563 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms