RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.93	□□□□□ -0.5
PGAP2-231	ENST00000528216	C4A	P0C0L4	1744 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	C4B	P0C0L5	1744 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	SH2B2	O14492	632 aa	Predicted RBP	11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	GNPAT	O15228	680 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	HAND2	P61296	217 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	CHRND	Q07001	517 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	SART3	Q15020	963 aa	Known RBP	11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	CCDC73	Q6ZRK6	1079 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	SMIM5	Q71RC9	77 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	WASF1	Q92558	559 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	DACT1	Q9NYF0	836 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	TFIP11	Q9UBB9	837 aa	Known RBP	11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	ORC3	Q9UBD5	711 aa	Predicted RBP	11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	WWC3	Q9ULE0	1092 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	HPS5	Q9UPZ3	1129 aa		11.92	□□□□□ -0.5
PGAP2-231	ENST00000528216	LY75	O60449	1722 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	RPS6KA4	O75676	772 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	LIG1	P18858	919 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	TERF1	P54274	439 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	CAVIN4	Q5BKX8	364 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	GIMAP6	Q6P9H5	292 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	SASS6	Q6UVJ0	657 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	SYNE3	Q6ZMZ3	975 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	IFNL3	Q8IZI9	196 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	MAGEB6	Q8N7X4	407 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	STAG1	Q8WVM7	1258 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	ANKRD2	Q9GZV1	360 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	POLR3E	Q9NVU0	708 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	NARF	Q9UHQ1	456 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	DENND2A	Q9ULE3	1009 aa		11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.91	□□□□□ -0.5
PGAP2-231	ENST00000528216	CCDC196	A0A1B0GTZ2	297 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	GOLGA6L6	A8MZA4	724 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	PTMA	P06454	111 aa	Known RBP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	FDPS	P14324	419 aa	Known RBP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	METAP2	P50579	478 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	TYRO3	Q06418	890 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	AKNAD1	Q5T1N1	836 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	PGBD1	Q96JS3	809 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	NCOA5	Q9HCD5	579 aa	Known RBP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	SEC31B	Q9NQW1	1179 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	ANAPC4	Q9UJX5	808 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	RTCB	Q9Y3I0	505 aa	Known RBP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	RGPD4	Q7Z3J3	1758 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216		A0A0G2JLW4	131 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	ZBTB43	O43298	467 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	MBD4	O95243	580 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	FAM160A1	Q05DH4	1040 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	FAM173B	Q6P4H8	233 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	APOA5	Q6Q788	366 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	TBC1D10C	Q8IV04	446 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	HELB	Q8NG08	1087 aa	Predicted RBP	11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	NBPF3	Q9H094	633 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	LRP2BP	Q9P2M1	347 aa		11.9	□□□□□ -0.5
PGAP2-231	ENST00000528216	CASZ1	Q86V15	1759 aa		11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	KIN	O60870	393 aa	Known RBP	11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	TRAPPC3L	Q5T215	181 aa		11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	ADAL	Q6DHV7	355 aa		11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	MFSD6	Q6ZSS7	791 aa		11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	JMY	Q8N9B5	988 aa		11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	IGDCC4	Q8TDY8	1250 aa		11.89	□□□□□ -0.51
PGAP2-231	ENST00000528216	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	ERICH2	A1L162	156 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	GSG1L2	A8MUP6	293 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	TRIM29	Q14134	588 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	TMEM67	Q5HYA8	995 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	CHST3	Q7LGC8	479 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	AMIGO3	Q86WK7	504 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	NLRP3	Q96P20	1036 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	SETDB2	Q96T68	719 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	MAST2	Q6P0Q8	1798 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	CCDC69	A6NI79	296 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	OFD1	O75665	1012 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	ADCY5	O95622	1261 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	GTF2E1	P29083	439 aa	Predicted RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	TDO2	P48775	406 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	BCAM	P50895	628 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	KIAA2012	Q0VF49	1180 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	TPTE2	Q6XPS3	522 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	COL23A1	Q86Y22	540 aa	Predicted RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	CCAR1	Q8IX12	1150 aa	Known RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	FLAD1	Q8NFF5	587 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	TDRD7	Q8NHU6	1098 aa	Known RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	MRPS27	Q92552	414 aa	Known RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	USP28	Q96RU2	1077 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	BRIP1	Q9BX63	1249 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	LY9	Q9HBG7	655 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	SLC12A7	Q9Y666	1083 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216	MRVI1	Q9Y6F6	885 aa		11.88	□□□□□ -0.51
PGAP2-231	ENST00000528216		B4E1Z4	1266 aa		11.87	□□□□□ -0.51
PGAP2-231	ENST00000528216	ZPR1	O75312	459 aa		11.87	□□□□□ -0.51
PGAP2-231	ENST00000528216	NR1I2	O75469	434 aa		11.87	□□□□□ -0.51
PGAP2-231	ENST00000528216	IARS	P41252	1262 aa	Known RBP	11.87	□□□□□ -0.51
PGAP2-231	ENST00000528216	STK38	Q15208	465 aa		11.87	□□□□□ -0.51
PGAP2-231	ENST00000528216	ERFE	Q4G0M1	354 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms