RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039	MRI	Q9BWK5	157 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	CPA4	Q9UI42	421 aa		13.81	□□□□□ -0.2
RBM4-210	ENST00000528039	LAMA3	Q16787	3333 aa		13.8	□□□□□ -0.2
RBM4-210	ENST00000528039	WDHD1	O75717	1129 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM4-210	ENST00000528039	PDE8B	O95263	885 aa		13.8	□□□□□ -0.2
RBM4-210	ENST00000528039	GNRH1	P01148	92 aa		13.8	□□□□□ -0.2
RBM4-210	ENST00000528039	PPAT	Q06203	517 aa		13.8	□□□□□ -0.2
RBM4-210	ENST00000528039	FKBP1C	Q5VVH2	108 aa		13.8	□□□□□ -0.2
RBM4-210	ENST00000528039	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM4-210	ENST00000528039		A0A0C4DFX4	3053 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	PSMC4	P43686	418 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	MOGS	Q13724	837 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	CHRDL2	Q6WN34	429 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	MRS2	Q9HD23	443 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	TMOD2	Q9NZR1	351 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	SRRD	Q9UH36	339 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	ADGRA2	Q96PE1	1338 aa		13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM4-210	ENST00000528039	PDHX	O00330	501 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	FGFR2	P21802	821 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	OSBP	P22059	807 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	PRMT2	P55345	433 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	DCAF15	Q66K64	600 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	HHIPL2	Q6UWX4	724 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	ANKRD23	Q86SG2	305 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	HOOK2	Q96ED9	719 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	ZNF341	Q9BYN7	854 aa		13.78	□□□□□ -0.2
RBM4-210	ENST00000528039	COL6A3	P12111	3177 aa		13.77	□□□□□ -0.2
RBM4-210	ENST00000528039	MAST3	O60307	1309 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	NFIA	Q12857	509 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	UBE2Q1	Q7Z7E8	422 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	FAM151A	Q8WW52	585 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	DPF3	Q92784	378 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	RBM27	Q9P2N5	1060 aa	Known RBP	13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	ZNF112	Q9UJU3	913 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	KCNH4	Q9UQ05	1017 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	SUGT1	Q9Y2Z0	365 aa		13.77	□□□□□ -0.21
RBM4-210	ENST00000528039	KIF16B	Q96L93	1317 aa		13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	FMNL1	O95466	1100 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	GRK4	P32298	578 aa		13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	TCP10	Q12799	353 aa		13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	PUM3	Q15397	648 aa	Known RBP	13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	DIXDC1	Q155Q3	683 aa		13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	RAET1E	Q8TD07	263 aa		13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	DAGLA	Q9Y4D2	1042 aa		13.76	□□□□□ -0.21
RBM4-210	ENST00000528039	MYPN	Q86TC9	1320 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	CYP2C8	P10632	490 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	CCL5	P13501	91 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	GJA8	P48165	433 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	CDC42EP5	Q6NZY7	148 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	ZFPM1	Q8IX07	1006 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	FAM198A	Q9UFP1	575 aa		13.75	□□□□□ -0.21
RBM4-210	ENST00000528039	GJB1	P08034	283 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	IFIT1	P09914	478 aa	Known RBP	13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	PRDX5	P30044	214 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	PRKCZ	Q05513	592 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	NOL9	Q5SY16	702 aa	Known RBP	13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	GPAT2	Q6NUI2	795 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	MRPL50	Q8N5N7	158 aa	Known RBP	13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	USP44	Q9H0E7	712 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	RNF208	Q9H0X6	261 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	GABRQ	Q9UN88	632 aa		13.74	□□□□□ -0.21
RBM4-210	ENST00000528039	BCR	P11274	1271 aa		13.73	□□□□□ -0.21
RBM4-210	ENST00000528039	HOXD10	P28358	340 aa		13.73	□□□□□ -0.21
RBM4-210	ENST00000528039	RFX5	P48382	616 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM4-210	ENST00000528039	NKX2-3	Q8TAU0	364 aa		13.73	□□□□□ -0.21
RBM4-210	ENST00000528039	WDR66	Q8TBY9	1149 aa		13.73	□□□□□ -0.21
RBM4-210	ENST00000528039	PRO3102	Q9H379	93 aa		13.73	□□□□□ -0.21
RBM4-210	ENST00000528039	ATRNL1	Q5VV63	1379 aa		13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	EYA2	O00167	538 aa		13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	ATG9A	Q7Z3C6	839 aa		13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	LPIN2	Q92539	896 aa		13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	PARK7	Q99497	189 aa	Known RBP	13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	UNC93B1	Q9H1C4	597 aa		13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	USP40	Q9NVE5	1235 aa		13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	BIN2	Q9UBW5	565 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM4-210	ENST00000528039	PHF20L1	A8MW92	1017 aa		13.71	□□□□□ -0.21
RBM4-210	ENST00000528039	CXCL11	O14625	94 aa		13.71	□□□□□ -0.21
RBM4-210	ENST00000528039	SLURP2	P0DP57	97 aa		13.71	□□□□□ -0.21
RBM4-210	ENST00000528039	SLC5A1	P13866	664 aa		13.71	□□□□□ -0.21
RBM4-210	ENST00000528039	FCGRT	P55899	365 aa		13.71	□□□□□ -0.21
RBM4-210	ENST00000528039	U2AF1L4	Q8WU68	220 aa	Known RBP	13.71	□□□□□ -0.21
RBM4-210	ENST00000528039	ZNF521	Q96K83	1311 aa		13.7	□□□□□ -0.22
RBM4-210	ENST00000528039		A0A0G2JLL6	359 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	LDHB	P07195	334 aa	Known RBP	13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	UBXN2A	P68543	259 aa		13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	SH3BP5L	Q7L8J4	393 aa		13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	SLAIN1	Q8ND83	568 aa		13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	HTATIP2	Q9BUP3	242 aa		13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	ZHX2	Q9Y6X8	837 aa		13.7	□□□□□ -0.22
RBM4-210	ENST00000528039	PTPRC	P08575	1304 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	ZBTB7B	O15156	539 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	ADCY3	O60266	1144 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	FARP2	O94887	1054 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	ELN	P15502	786 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	PTPRA	P18433	802 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	SCYL3	Q8IZE3	742 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	FAM9B	Q8IZU0	186 aa		13.69	□□□□□ -0.22
RBM4-210	ENST00000528039	SSH1	Q8WYL5	1049 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms