RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 HMG20BQ9P0W2 317 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 DDX19BQ9UMR2 479 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 EXOC6BQ9Y2D4 811 aa19.11■□□□□ 0.65
CAPN1-213ENST00000527897 OTOFQ9HC10 1997 aa19.1■□□□□ 0.65
CAPN1-213ENST00000527897 TBC1D9Q6ZT07 1266 aa19.1■□□□□ 0.65
CAPN1-213ENST00000527897 FAM83AQ86UY5 434 aa19.1■□□□□ 0.65
CAPN1-213ENST00000527897 YTHDC1Q96MU7 727 aaKnown RBP19.1■□□□□ 0.65
CAPN1-213ENST00000527897 DBNDD2Q9BQY9 259 aa19.1■□□□□ 0.65
CAPN1-213ENST00000527897 ELP3Q9H9T3 547 aa19.1■□□□□ 0.65
CAPN1-213ENST00000527897 SAGE1Q9NXZ1 904 aa19.1■□□□□ 0.65
CAPN1-213ENST00000527897 PDS5AQ29RF7 1337 aaKnown RBP19.09■□□□□ 0.65
CAPN1-213ENST00000527897 APBB1O00213 710 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 UQCRFS1P1P0C7P4 283 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 ARID4AP29374 1257 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-213ENST00000527897 MCAMP43121 646 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 SREBF2Q12772 1141 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 CCDC158Q5M9N0 1113 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 FKBP1CQ5VVH2 108 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 SLF2Q8IX21 1173 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-213ENST00000527897 WNK4Q96J92 1243 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 CCDC8Q9H0W5 538 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-213ENST00000527897 GPR108Q9NPR9 543 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 SNRKQ9NRH2 765 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 RAI14Q9P0K7 980 aa19.09■□□□□ 0.65
CAPN1-213ENST00000527897 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
CAPN1-213ENST00000527897 NFIAQ12857 509 aa19.08■□□□□ 0.64
CAPN1-213ENST00000527897 C20orf194Q5TEA3 1177 aa19.08■□□□□ 0.64
CAPN1-213ENST00000527897 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
CAPN1-213ENST00000527897 MECOMQ03112 1051 aa19.07■□□□□ 0.64
CAPN1-213ENST00000527897 MIGA2Q7L4E1 593 aa19.07■□□□□ 0.64
CAPN1-213ENST00000527897 FAM151AQ8WW52 585 aa19.07■□□□□ 0.64
CAPN1-213ENST00000527897 TLR7Q9NYK1 1049 aaKnown RBP19.07■□□□□ 0.64
CAPN1-213ENST00000527897 LRP2BPQ9P2M1 347 aa19.07■□□□□ 0.64
CAPN1-213ENST00000527897 CSADQ9Y600 493 aa19.07■□□□□ 0.64
CAPN1-213ENST00000527897 UNCXA6NJT0 531 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 ZBTB22O15209 634 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 ZBTB48P10074 688 aaPredicted RBP19.06■□□□□ 0.64
CAPN1-213ENST00000527897 BTDP43251 543 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 TM4SF4P48230 202 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 OPTNQ96CV9 577 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 HOOK2Q96ED9 719 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 WRNIP1Q96S55 665 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 ZBTB40Q9NUA8 1239 aa19.06■□□□□ 0.64
CAPN1-213ENST00000527897 MROH7-TTC4A0A0A0MT08 1334 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 MANSC4A6NHS7 340 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-213ENST00000527897 GJA5P36382 358 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 MAP3K9P80192 1104 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 PICALMQ13492 652 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 VGLL4Q14135 290 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 DCAF15Q66K64 600 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-213ENST00000527897 ERC1Q8IUD2 1116 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.05■□□□□ 0.64
CAPN1-213ENST00000527897 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 EAF2Q96CJ1 260 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-213ENST00000527897 CHMP4BQ9H444 224 aaKnown RBP19.05■□□□□ 0.64
CAPN1-213ENST00000527897 IL1RAPL2Q9NP60 686 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 FAM198AQ9UFP1 575 aa19.05■□□□□ 0.64
CAPN1-213ENST00000527897 DBNLQ9UJU6 430 aaKnown RBP19.05■□□□□ 0.64
CAPN1-213ENST00000527897 GAKO14976 1311 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 HMMRO75330 724 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 RGS3P49796 1198 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 GSTO1P78417 241 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 HSP90AB4PQ58FF6 505 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 AACSQ86V21 672 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 ZSCAN29Q8IWY8 852 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-213ENST00000527897 ZFPM1Q8IX07 1006 aa19.04■□□□□ 0.64
CAPN1-213ENST00000527897 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-213ENST00000527897 ZKSCAN4Q969J2 545 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-213ENST00000527897 RPAP1Q9BWH6 1393 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-213ENST00000527897 LDHCP07864 332 aa19.03■□□□□ 0.64
CAPN1-213ENST00000527897 DGKZQ13574 1117 aa19.03■□□□□ 0.64
CAPN1-213ENST00000527897 PDE3AQ14432 1141 aa19.03■□□□□ 0.64
CAPN1-213ENST00000527897 NSUN4Q96CB9 384 aaKnown RBP19.03■□□□□ 0.64
CAPN1-213ENST00000527897 OTUD5Q96G74 571 aa19.03■□□□□ 0.64
CAPN1-213ENST00000527897 ZNF341Q9BYN7 854 aa19.03■□□□□ 0.64
CAPN1-213ENST00000527897 ZAP70P43403 619 aa19.02■□□□□ 0.64
CAPN1-213ENST00000527897 IFNL1Q8IU54 200 aa19.02■□□□□ 0.64
CAPN1-213ENST00000527897 ZNF384Q8TF68 577 aa19.02■□□□□ 0.64
CAPN1-213ENST00000527897 FAM163AQ96GL9 167 aaPredicted RBP19.02■□□□□ 0.64
CAPN1-213ENST00000527897 NOL10Q9BSC4 688 aaKnown RBP19.02■□□□□ 0.64
CAPN1-213ENST00000527897 MYO5AQ9Y4I1 1855 aaKnown RBP19.01■□□□□ 0.63
CAPN1-213ENST00000527897 CYP2E1P05181 493 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-213ENST00000527897 INHBEP58166 350 aa19.01■□□□□ 0.63
CAPN1-213ENST00000527897 NAA16Q6N069 864 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-213ENST00000527897 SIRT2Q8IXJ6 389 aa19.01■□□□□ 0.63
CAPN1-213ENST00000527897 RHPN1Q8TCX5 695 aa19.01■□□□□ 0.63
CAPN1-213ENST00000527897 ABHD8Q96I13 439 aa19.01■□□□□ 0.63
CAPN1-213ENST00000527897 MCOLN1Q9GZU1 580 aa19.01■□□□□ 0.63
CAPN1-213ENST00000527897 DOCK2Q92608 1830 aa19■□□□□ 0.63
CAPN1-213ENST00000527897 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
CAPN1-213ENST00000527897 IGF2BP3O00425 579 aaKnown RBP eCLIP19■□□□□ 0.63
CAPN1-213ENST00000527897 INPP5BP32019 993 aa19■□□□□ 0.63
CAPN1-213ENST00000527897 IDI2Q9BXS1 227 aa19■□□□□ 0.63
CAPN1-213ENST00000527897 DDX4Q9NQI0 724 aaKnown RBP19■□□□□ 0.63
CAPN1-213ENST00000527897 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
CAPN1-213ENST00000527897 NDUFB9Q9Y6M9 179 aa19■□□□□ 0.63
CAPN1-213ENST00000527897 ENTPD3O75355 529 aa18.99■□□□□ 0.63
CAPN1-213ENST00000527897 WDHD1O75717 1129 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms