RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
CAPN1-210ENST00000527699 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
CAPN1-210ENST00000527699 WDHD1O75717 1129 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-210ENST00000527699 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
CAPN1-210ENST00000527699 MMP14P50281 582 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 METTL24Q5JXM2 366 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 VPS37DQ86XT2 251 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
CAPN1-210ENST00000527699 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 KAZALD1Q96I82 304 aa12.49□□□□□ -0.41
CAPN1-210ENST00000527699 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
CAPN1-210ENST00000527699 COL1A1P02452 1464 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-210ENST00000527699 PRMT2P55345 433 aa12.48□□□□□ -0.41
CAPN1-210ENST00000527699 FKBP1AP62942 108 aaKnown RBP12.48□□□□□ -0.41
CAPN1-210ENST00000527699 FAM205AQ6ZU69 1335 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 LACTBP83111 547 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-210ENST00000527699 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-210ENST00000527699 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-210ENST00000527699 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 CDX2Q99626 313 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-210ENST00000527699 HCN4Q9Y3Q4 1203 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 LAMB1P07942 1786 aa12.47□□□□□ -0.41
CAPN1-210ENST00000527699 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 GNRH1P01148 92 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 VGLL4Q14135 290 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 CCL15Q16663 113 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 ANKRD44Q8N8A2 993 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 TEPSINQ96N21 525 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 SERPINA10Q9UK55 444 aa12.46□□□□□ -0.41
CAPN1-210ENST00000527699 MUC3AQ02505 3323 aa12.46□□□□□ -0.42
CAPN1-210ENST00000527699 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.42
CAPN1-210ENST00000527699 PIEZO1Q92508 2521 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 SYNGAP1Q96PV0 1343 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 SGPL1O95470 568 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-210ENST00000527699 HOXD10P28358 340 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 TNFAIP1Q13829 316 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 ALYREFQ86V81 257 aaKnown RBP12.45□□□□□ -0.42
CAPN1-210ENST00000527699 FAM43AQ8N2R8 423 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
CAPN1-210ENST00000527699 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 ZKSCAN4Q969J2 545 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-210ENST00000527699 PAWRQ96IZ0 340 aaKnown RBP12.45□□□□□ -0.42
CAPN1-210ENST00000527699 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 UNC93B1Q9H1C4 597 aa12.45□□□□□ -0.42
CAPN1-210ENST00000527699 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
CAPN1-210ENST00000527699 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 OTOFQ9HC10 1997 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-210ENST00000527699 FOSL2P15408 326 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 TNNI2P48788 182 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 CAVIN4Q5BKX8 364 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 MIGA2Q7L4E1 593 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 FBXO33Q7Z6M2 555 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 CSADQ9Y600 493 aa12.44□□□□□ -0.42
CAPN1-210ENST00000527699 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-210ENST00000527699 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-210ENST00000527699 TCP10Q12799 353 aa12.43□□□□□ -0.42
CAPN1-210ENST00000527699 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
CAPN1-210ENST00000527699 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
CAPN1-210ENST00000527699 TEKT1Q969V4 418 aa12.43□□□□□ -0.42
CAPN1-210ENST00000527699 WRNIP1Q96S55 665 aa12.43□□□□□ -0.42
CAPN1-210ENST00000527699 SIL1Q9H173 461 aa12.43□□□□□ -0.42
CAPN1-210ENST00000527699 MYPNQ86TC9 1320 aa12.42□□□□□ -0.42
CAPN1-210ENST00000527699 PSMC4P43686 418 aa12.42□□□□□ -0.42
CAPN1-210ENST00000527699 GTF2A2P52657 109 aa12.42□□□□□ -0.42
CAPN1-210ENST00000527699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN1-210ENST00000527699 DEFB118Q96PH6 123 aa12.42□□□□□ -0.42
CAPN1-210ENST00000527699 SNCAIPQ9Y6H5 919 aa12.42□□□□□ -0.42
CAPN1-210ENST00000527699 BTBD19C9JJ37 291 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 PDE8BO95263 885 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 OSBPP22059 807 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 DIS3LQ8TF46 1054 aaKnown RBP12.41□□□□□ -0.42
CAPN1-210ENST00000527699 SSH1Q8WYL5 1049 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 TMOD2Q9NZR1 351 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 NCOR1O75376 2440 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
CAPN1-210ENST00000527699 UTYO14607 1347 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 IRF6O14896 467 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 TLR2O60603 784 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
CAPN1-210ENST00000527699 INPP5BP32019 993 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 MDM2Q00987 491 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-210ENST00000527699 DIXDC1Q155Q3 683 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 RABL6Q3YEC7 729 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-210ENST00000527699 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
CAPN1-210ENST00000527699 VGLL2Q8N8G2 317 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 USP44Q9H0E7 712 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 CPA4Q9UI42 421 aa12.4□□□□□ -0.42
CAPN1-210ENST00000527699 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms