RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 IL1RAPL2Q9NP60 686 aa22.3■■□□□ 1.16
TRIM3-205ENST00000527237 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
TRIM3-205ENST00000527237 GAKO14976 1311 aa22.3■■□□□ 1.16
TRIM3-205ENST00000527237 RFX7Q2KHR2 1363 aa22.29■■□□□ 1.16
TRIM3-205ENST00000527237 HSPA8P11142 646 aaKnown RBP22.29■■□□□ 1.16
TRIM3-205ENST00000527237 KIF23Q02241 960 aaPredicted RBP22.29■■□□□ 1.16
TRIM3-205ENST00000527237 CDC42EP5Q6NZY7 148 aa22.29■■□□□ 1.16
TRIM3-205ENST00000527237 ARMC9Q7Z3E5 817 aa22.29■■□□□ 1.16
TRIM3-205ENST00000527237 CCDC102AQ96A19 550 aa22.29■■□□□ 1.16
TRIM3-205ENST00000527237 UQCRFS1P1P0C7P4 283 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 MECOMQ03112 1051 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 MKRN3Q13064 507 aaKnown RBP22.28■■□□□ 1.16
TRIM3-205ENST00000527237 LDLRAD1Q5T700 205 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 RHPN1Q8TCX5 695 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 CLMNQ96JQ2 1002 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 TMOD2Q9NZR1 351 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 DOCK1Q14185 1865 aa22.28■■□□□ 1.16
TRIM3-205ENST00000527237 MYH1P12882 1939 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 RPAP1Q9BWH6 1393 aaPredicted RBP22.27■■□□□ 1.16
TRIM3-205ENST00000527237 TNNI2P48788 182 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 LBX1P52954 281 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 NFIAQ12857 509 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 MAP3K11Q16584 847 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 ERICH6Q7L0X2 663 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 AACSQ86V21 672 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 ERC1Q8IUD2 1116 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 MROH7-TTC4A0A0A0MT08 1334 aa22.27■■□□□ 1.16
TRIM3-205ENST00000527237 HMMRO75330 724 aa22.26■■□□□ 1.15
TRIM3-205ENST00000527237 USP2O75604 605 aaPredicted RBP22.26■■□□□ 1.15
TRIM3-205ENST00000527237 CTCFP49711 727 aaPredicted RBP22.26■■□□□ 1.15
TRIM3-205ENST00000527237 SUPT20HL1Q3ZLR7 823 aa22.26■■□□□ 1.15
TRIM3-205ENST00000527237 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
TRIM3-205ENST00000527237 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
TRIM3-205ENST00000527237 NDUFB9Q9Y6M9 179 aa22.26■■□□□ 1.15
TRIM3-205ENST00000527237 PHIPQ8WWQ0 1821 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 ZAP70P43403 619 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 TCP10Q12799 353 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 SPTY2D1Q68D10 685 aaPredicted RBP22.25■■□□□ 1.15
TRIM3-205ENST00000527237 FAM83AQ86UY5 434 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 NAV1Q8NEY1 1877 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 PTPRFP10586 1907 aa22.25■■□□□ 1.15
TRIM3-205ENST00000527237 PPP1R12BO60237 982 aaPredicted RBP22.24■■□□□ 1.15
TRIM3-205ENST00000527237 CYP2E1P05181 493 aaPredicted RBP22.24■■□□□ 1.15
TRIM3-205ENST00000527237 BTDP43251 543 aa22.24■■□□□ 1.15
TRIM3-205ENST00000527237 FKBP1CQ5VVH2 108 aa22.24■■□□□ 1.15
TRIM3-205ENST00000527237 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
TRIM3-205ENST00000527237 USP40Q9NVE5 1235 aa22.24■■□□□ 1.15
TRIM3-205ENST00000527237 FAM198AQ9UFP1 575 aa22.24■■□□□ 1.15
TRIM3-205ENST00000527237 HSP90AB4PQ58FF6 505 aa22.23■■□□□ 1.15
TRIM3-205ENST00000527237 KIF1BPQ96EK5 621 aa22.23■■□□□ 1.15
TRIM3-205ENST00000527237 ZNF512BQ96KM6 892 aaPredicted RBP22.23■■□□□ 1.15
TRIM3-205ENST00000527237 CSRNP1Q96S65 589 aa22.23■■□□□ 1.15
TRIM3-205ENST00000527237 BEGAINQ9BUH8 593 aa22.23■■□□□ 1.15
TRIM3-205ENST00000527237 PIH1D3Q9NQM4 214 aaKnown RBP22.23■■□□□ 1.15
TRIM3-205ENST00000527237 RAI14Q9P0K7 980 aa22.23■■□□□ 1.15
TRIM3-205ENST00000527237 DDX60LQ5H9U9 1706 aaKnown RBP22.23■■□□□ 1.15
TRIM3-205ENST00000527237 IREB2P48200 963 aaKnown RBP22.22■■□□□ 1.15
TRIM3-205ENST00000527237 ZFPM1Q8IX07 1006 aa22.22■■□□□ 1.15
TRIM3-205ENST00000527237 GJA5P36382 358 aa22.21■■□□□ 1.15
TRIM3-205ENST00000527237 SPRYD7Q5W111 196 aa22.21■■□□□ 1.15
TRIM3-205ENST00000527237 CRBNQ96SW2 442 aa22.21■■□□□ 1.15
TRIM3-205ENST00000527237 DDX4Q9NQI0 724 aaKnown RBP22.21■■□□□ 1.15
TRIM3-205ENST00000527237 LRP2BPQ9P2M1 347 aa22.21■■□□□ 1.15
TRIM3-205ENST00000527237 RGS3P49796 1198 aa22.2■■□□□ 1.14
TRIM3-205ENST00000527237 RHBDL3P58872 404 aa22.2■■□□□ 1.14
TRIM3-205ENST00000527237 ADGRA1Q86SQ6 560 aa22.2■■□□□ 1.14
TRIM3-205ENST00000527237 FAM151AQ8WW52 585 aa22.2■■□□□ 1.14
TRIM3-205ENST00000527237 FAM163AQ96GL9 167 aaPredicted RBP22.2■■□□□ 1.14
TRIM3-205ENST00000527237 WNK4Q96J92 1243 aa22.2■■□□□ 1.14
TRIM3-205ENST00000527237 GPR75-ASB3A0A0A6YYF3 556 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 WDHD1O75717 1129 aaPredicted RBP22.19■■□□□ 1.14
TRIM3-205ENST00000527237 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.19■■□□□ 1.14
TRIM3-205ENST00000527237 SLF2Q8IX21 1173 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 ANKRD13AQ8IZ07 590 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.19■■□□□ 1.14
TRIM3-205ENST00000527237 CNKSR2Q8WXI2 1034 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 ANTXR1Q9H6X2 564 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 ELP3Q9H9T3 547 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 PRDM10Q9NQV6 1147 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 PCDHB15Q9Y5E8 787 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 ATRNL1Q5VV63 1379 aa22.19■■□□□ 1.14
TRIM3-205ENST00000527237 SMARCA5O60264 1052 aaPredicted RBP22.18■■□□□ 1.14
TRIM3-205ENST00000527237 RAB11FIP3O75154 756 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 PICALMQ13492 652 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 VGLL4Q14135 290 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 MIGA2Q7L4E1 593 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 CLASRPQ8N2M8 674 aaKnown RBP22.18■■□□□ 1.14
TRIM3-205ENST00000527237 SLC10A4Q96EP9 437 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 IDI2Q9BXS1 227 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 RNF186Q9NXI6 227 aa22.18■■□□□ 1.14
TRIM3-205ENST00000527237 SLURP2P0DP57 97 aa22.17■■□□□ 1.14
TRIM3-205ENST00000527237 GSTO1P78417 241 aa22.17■■□□□ 1.14
TRIM3-205ENST00000527237 SH3BP5LQ7L8J4 393 aa22.17■■□□□ 1.14
TRIM3-205ENST00000527237 MYH8P13535 1937 aa22.17■■□□□ 1.14
TRIM3-205ENST00000527237 BAZ2AQ9UIF9 1905 aaKnown RBP22.17■■□□□ 1.14
TRIM3-205ENST00000527237 CA12O43570 354 aa22.16■■□□□ 1.14
TRIM3-205ENST00000527237 TRPA1O75762 1119 aa22.16■■□□□ 1.14
TRIM3-205ENST00000527237 NAA16Q6N069 864 aaPredicted RBP22.16■■□□□ 1.14
TRIM3-205ENST00000527237 WRNIP1Q96S55 665 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms