RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 EXOC4Q96A65 974 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 CARD6Q9BX69 1037 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 TSPYL1Q9H0U9 437 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 ANKZF1Q9H8Y5 726 aa10.73□□□□□ -0.69
SCN3B-203ENST00000527125 RNF113AO15541 343 aaKnown RBP10.72□□□□□ -0.69
SCN3B-203ENST00000527125 MYL5Q02045 173 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 OSBP2Q969R2 916 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 WDR17Q8IZU2 1322 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 CIAO1O76071 339 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
SCN3B-203ENST00000527125 TMCO3Q6UWJ1 677 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 ANKRD24Q8TF21 1146 aa10.72□□□□□ -0.69
SCN3B-203ENST00000527125 NR1I3Q14994 352 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 BEND6Q5SZJ8 279 aaPredicted RBP10.71□□□□□ -0.69
SCN3B-203ENST00000527125 COPS6Q7L5N1 327 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 IPO4Q8TEX9 1081 aaKnown RBP10.71□□□□□ -0.69
SCN3B-203ENST00000527125 MYD88Q99836 296 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 PARD6BQ9BYG5 372 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 OAS2P29728 719 aaKnown RBP10.71□□□□□ -0.69
SCN3B-203ENST00000527125 TTLL5Q6EMB2 1281 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 OTUD7BQ6GQQ9 843 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 TOGARAM2Q6ZUX3 1019 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 EPC1Q9H2F5 836 aa10.71□□□□□ -0.69
SCN3B-203ENST00000527125 FAM217BQ9NTX9 383 aaPredicted RBP10.71□□□□□ -0.69
SCN3B-203ENST00000527125 CCDC151A5D8V7 595 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 GOLGA6L9A6NEM1 432 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 SMC2O95347 1197 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 NOP2P46087 812 aaKnown RBP10.71□□□□□ -0.7
SCN3B-203ENST00000527125 TPM4P67936 248 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 GUCY1B3Q02153 619 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 SMC1AQ14683 1233 aaKnown RBP10.71□□□□□ -0.7
SCN3B-203ENST00000527125 UBXN4Q92575 508 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 GJB4Q9NTQ9 266 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 EID1Q9Y6B2 187 aa10.71□□□□□ -0.7
SCN3B-203ENST00000527125 RIC1Q4ADV7 1423 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 ZC3H4Q9UPT8 1303 aaKnown RBP10.7□□□□□ -0.7
SCN3B-203ENST00000527125 CBFA2T2O43439 604 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
SCN3B-203ENST00000527125 MORC3Q14149 939 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 ANKRD13DQ6ZTN6 518 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 UTP14AQ9BVJ6 771 aaKnown RBP10.7□□□□□ -0.7
SCN3B-203ENST00000527125 ZCCHC17Q9NP64 241 aaKnown RBP10.7□□□□□ -0.7
SCN3B-203ENST00000527125 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCN3B-203ENST00000527125 ERICH4A6NGS2 130 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 UBASH3AP57075 661 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 NEK11Q8NG66 645 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 SDF4Q9BRK5 362 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 TEX13AQ9BXU3 409 aaPredicted RBP10.7□□□□□ -0.7
SCN3B-203ENST00000527125 LCMT1Q9UIC8 334 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 TNS2Q63HR2 1409 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 ZMYM6O95789 1325 aa10.7□□□□□ -0.7
SCN3B-203ENST00000527125 A0A1B0GTH6 734 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 SH2B2O14492 632 aaPredicted RBP10.69□□□□□ -0.7
SCN3B-203ENST00000527125 ZSCAN12O43309 604 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 TXLNAP40222 546 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 BRD3Q15059 726 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 KRBA2Q6ZNG9 492 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 MRPL44Q9H9J2 332 aaKnown RBP10.69□□□□□ -0.7
SCN3B-203ENST00000527125 FANCLQ9NW38 375 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 ARGLU1Q9NWB6 273 aaPredicted RBP10.69□□□□□ -0.7
SCN3B-203ENST00000527125 STK36Q9NRP7 1315 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 FMR1Q06787 632 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCN3B-203ENST00000527125 GOLGA8FQ08AF8 430 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 GOLGA8DPQ0D2H9 430 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 LONRF3Q496Y0 759 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 RIC3Q7Z5B4 369 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 ENOX1Q8TC92 643 aaKnown RBP10.69□□□□□ -0.7
SCN3B-203ENST00000527125 C8orf76Q96K31 380 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 L1RE1Q9UN81 338 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 CUTAO60888 179 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 GCP02774 474 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 PHKG2P15735 406 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 PPP2R3AQ06190 1150 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 PNOCQ13519 176 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 STK38Q15208 465 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 STK11IPQ8N1F8 1099 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 PLBD2Q8NHP8 589 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 PANX2Q96RD6 677 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 ADAM21Q9UKJ8 722 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 CASZ1Q86V15 1759 aa10.69□□□□□ -0.7
SCN3B-203ENST00000527125 GOLIM4O00461 696 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 SF3A1Q15459 793 aaKnown RBP10.68□□□□□ -0.7
SCN3B-203ENST00000527125 C1orf141Q5JVX7 400 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 JAKMIP3Q5VZ66 844 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 CHST3Q7LGC8 479 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
SCN3B-203ENST00000527125 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
SCN3B-203ENST00000527125 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 NPM3O75607 178 aaKnown RBP10.68□□□□□ -0.7
SCN3B-203ENST00000527125 FGAP02671 866 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 TOB1P50616 345 aaPredicted RBP10.68□□□□□ -0.7
SCN3B-203ENST00000527125 LONRF2Q1L5Z9 754 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 CT47A1Q5JQC4 288 aaPredicted RBP10.68□□□□□ -0.7
SCN3B-203ENST00000527125 DHX58Q96C10 678 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 SEC31BQ9NQW1 1179 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 BIN1O00499 593 aa10.68□□□□□ -0.7
SCN3B-203ENST00000527125 RANBP6O60518 1105 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms