RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 U2AF1L5P0DN76 240 aaPredicted RBP5.03□□□□□ -1.6
C11orf54-204ENST00000527003 HOXC9P31274 260 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 TXLNAP40222 546 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 U2AF1Q01081 240 aaKnown RBP eCLIP5.03□□□□□ -1.6
C11orf54-204ENST00000527003 SH3PXD2AQ5TCZ1 1133 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 FAM9BQ8IZU0 186 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 PPP1R12CQ9BZL4 782 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 BLMP54132 1417 aaPredicted RBP5.03□□□□□ -1.6
C11orf54-204ENST00000527003 PLEKHG2Q9H7P9 1386 aa5.03□□□□□ -1.6
C11orf54-204ENST00000527003 SLIT3O75094 1523 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 ABCC6O95255 1503 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 U2SURPO15042 1029 aaKnown RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 ATP1A2P50993 1020 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 ZC3H6P61129 1189 aaKnown RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 EIF4A2Q14240 407 aaKnown RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 CCDC184Q52MB2 194 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 CRTC2Q53ET0 693 aaPredicted RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 HSP90AB2PQ58FF8 381 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 SHISA2Q6UWI4 295 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 SIX5Q8N196 739 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 LARGE2Q8N3Y3 721 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 TSEN2Q8NCE0 465 aaKnown RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 RUNDC1Q96C34 613 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 SLC30A3Q99726 388 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 TSPAN10Q9H1Z9 355 aaPredicted RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 PCMTD2Q9NV79 361 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 USP21Q9UK80 565 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 MED1Q15648 1581 aaPredicted RBP5.02□□□□□ -1.61
C11orf54-204ENST00000527003 USP54Q70EL1 1684 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 ROBO1Q9Y6N7 1651 aa5.02□□□□□ -1.61
C11orf54-204ENST00000527003 RGPD8O14715 1765 aaPredicted RBP5.01□□□□□ -1.61
C11orf54-204ENST00000527003 MAPK8IP3Q9UPT6 1336 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 TRPM3Q9HCF6 1732 aaPredicted RBP5.01□□□□□ -1.61
C11orf54-204ENST00000527003 LGR5O75473 907 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 RASA1P20936 1047 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 FBLN1P23142 703 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 EVA1CP58658 441 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 SPEM2Q0P670 501 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 TEAD4Q15561 434 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 ANKRD24Q8TF21 1146 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 FBXO41Q8TF61 875 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 GPC6Q9Y625 555 aaPredicted RBP5.01□□□□□ -1.61
C11orf54-204ENST00000527003 KIF20BQ96Q89 1820 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 PIK3C2AO00443 1686 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 NFAT5O94916 1531 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 KIAA0232Q92628 1395 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 NHSL1Q5SYE7 1610 aa5.01□□□□□ -1.61
C11orf54-204ENST00000527003 ANKRD26Q9UPS8 1709 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 IGSF1Q8N6C5 1336 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 ALS2Q96Q42 1657 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 ZBTB7CA1YPR0 619 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 FAM83GA6ND36 823 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 EML1O00423 815 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 LMOD1P29536 600 aaPredicted RBP5□□□□□ -1.61
C11orf54-204ENST00000527003 HSPA1LP34931 641 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 NOS2P35228 1153 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 IRAK1P51617 712 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 CALD1Q05682 793 aaKnown RBP5□□□□□ -1.61
C11orf54-204ENST00000527003 LMOD3Q0VAK6 560 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 PTK7Q13308 1070 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 PDE3BQ13370 1112 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 CCDC27Q2M243 656 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 AMOTQ4VCS5 1084 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 SULT6B1Q6IMI4 303 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 LRRC69Q6ZNQ3 347 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 SLC51AQ86UW1 340 aa5□□□□□ -1.61
C11orf54-204ENST00000527003 FMR1NBQ8N0W7 255 aaPredicted RBP5□□□□□ -1.61
C11orf54-204ENST00000527003 COL3A1P02461 1466 aaPredicted RBP5□□□□□ -1.61
C11orf54-204ENST00000527003 ZBED9Q6R2W3 1325 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 SERTM1A2A2V5 107 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L15C9J2P7 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L10C9JJH3 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L13C9JLJ4 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L12C9JPN9 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L11C9JVI0 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L21D6R901 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L18D6R9N7 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L22D6RA61 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L17D6RBQ6 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L19D6RCP7 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L20D6RJB6 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 M0R2N6 131 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 HTATSF1O43719 755 aaKnown RBP4.99□□□□□ -1.61
C11orf54-204ENST00000527003 C21orf2O43822 256 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 CENPBP07199 599 aaPredicted RBP4.99□□□□□ -1.61
C11orf54-204ENST00000527003 PRKAR2BP31323 418 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 HNRNPUQ00839 825 aaKnown RBP eCLIP4.99□□□□□ -1.61
C11orf54-204ENST00000527003 USP17L24Q0WX57 530 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 SFSWAPQ12872 951 aaKnown RBP4.99□□□□□ -1.61
C11orf54-204ENST00000527003 FZD5Q13467 585 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 GAS2L2Q8NHY3 880 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 LTV1Q96GA3 475 aaPredicted RBP4.99□□□□□ -1.61
C11orf54-204ENST00000527003 PLEKHF1Q96S99 279 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 CARD10Q9BWT7 1032 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 NLRP2Q9NX02 1062 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 ZNF232Q9UNY5 417 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 THRAP3Q9Y2W1 955 aaKnown RBP4.99□□□□□ -1.61
C11orf54-204ENST00000527003 KDRP35968 1356 aa4.99□□□□□ -1.61
C11orf54-204ENST00000527003 WDR17Q8IZU2 1322 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms