RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
CTNND1-215ENST00000526938 CLIC4Q9Y696 253 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 CARMIL3Q8ND23 1372 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 HIBADHP31937 336 aaKnown RBP10.03□□□□□ -0.8
CTNND1-215ENST00000526938 SSRP1Q08945 709 aaKnown RBP10.03□□□□□ -0.8
CTNND1-215ENST00000526938 SPECC1Q5M775 1068 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 APOA5Q6Q788 366 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 KCNJ14Q9UNX9 436 aa10.03□□□□□ -0.8
CTNND1-215ENST00000526938 CDKL5O76039 1030 aa10.02□□□□□ -0.8
CTNND1-215ENST00000526938 FGFR2P21802 821 aa10.02□□□□□ -0.8
CTNND1-215ENST00000526938 ARID4AP29374 1257 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-215ENST00000526938 SMARCC2Q8TAQ2 1214 aa10.02□□□□□ -0.8
CTNND1-215ENST00000526938 ALDH8A1Q9H2A2 487 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-215ENST00000526938 EPB41L4AQ9HCS5 686 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-215ENST00000526938 RFX7Q2KHR2 1363 aa10.02□□□□□ -0.8
CTNND1-215ENST00000526938 GSG1L2A8MUP6 293 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 USP17L21D6R901 530 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 CDC27P30260 824 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 RTN1Q16799 776 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 KRT40Q6A162 431 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 FBXO18Q8NFZ0 1043 aa10.02□□□□□ -0.81
CTNND1-215ENST00000526938 SPTLC2O15270 562 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 PRDX5P30044 214 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 FAM47AQ5JRC9 791 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 BARGINQ6ZT62 677 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 SLC51AQ86UW1 340 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 KRT23Q9C075 422 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 NYXQ9GZU5 481 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-215ENST00000526938 RIC1Q4ADV7 1423 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 G3V3G9 751 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 USP5P45974 858 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 PPARAQ07869 468 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 DCAF8Q5TAQ9 597 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 CLEC4GQ6UXB4 293 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 PDILTQ8N807 584 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 RPGRQ92834 1020 aaKnown RBP10.01□□□□□ -0.81
CTNND1-215ENST00000526938 FAM84BQ96KN1 310 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-215ENST00000526938 PCDHA7Q9UN72 937 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 RPS6KA4O75676 772 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 ADGRA1Q86SQ6 560 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 CNBD1Q8NA66 436 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 RNF41Q9H4P4 317 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-215ENST00000526938 CBX8Q9HC52 389 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 HPS5Q9UPZ3 1129 aa10.01□□□□□ -0.81
CTNND1-215ENST00000526938 PLEKHG2Q9H7P9 1386 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 AFDNP55196 1824 aaKnown RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 F8W031 263 aaPredicted RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 SH2B2O14492 632 aaPredicted RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 TXNRD3Q86VQ6 643 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 IQCA1Q86XH1 822 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 MRPS27Q92552 414 aaKnown RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 ESR2Q92731 530 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 TMEM87BQ96K49 555 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 CLSTN2Q9H4D0 955 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10□□□□□ -0.81
CTNND1-215ENST00000526938 TCHHQ07283 1943 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 RAD21O60216 631 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 TRIM37O94972 964 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 UBE4AQ14139 1066 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 NOL10Q9BSC4 688 aaKnown RBP10□□□□□ -0.81
CTNND1-215ENST00000526938 NBPF3Q9H094 633 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 CNNM2Q9H8M5 875 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 NARFQ9UHQ1 456 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 ZKSCAN5Q9Y2L8 839 aa10□□□□□ -0.81
CTNND1-215ENST00000526938 TSPY2A6NKD2 308 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 GOLGA6L6A8MZA4 724 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 BTBD18B2RXH4 712 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 GNAT2P19087 354 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 VPS72Q15906 364 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 IFIT1BQ5T764 474 aaKnown RBP9.99□□□□□ -0.81
CTNND1-215ENST00000526938 AMIGO3Q86WK7 504 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 CREBRFQ8IUR6 639 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 MRVI1Q9Y6F6 885 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 STRCQ7RTU9 1775 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 UVSSAQ2YD98 709 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 HSP90AA4PQ58FG1 418 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 CLIC6Q96NY7 704 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 GOLPH3LQ9H4A5 285 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 TCRBV5S4A2TA0A5A2 114 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 ANO1Q5XXA6 986 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 MKNK2Q9HBH9 465 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 SAP30BPQ9UHR5 308 aaKnown RBP9.99□□□□□ -0.81
CTNND1-215ENST00000526938 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 NOL7Q9UMY1 257 aaKnown RBP9.99□□□□□ -0.81
CTNND1-215ENST00000526938 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-215ENST00000526938 DISP2A7MBM2 1401 aa9.99□□□□□ -0.81
CTNND1-215ENST00000526938 ZNF804BA4D1E1 1349 aa9.98□□□□□ -0.81
CTNND1-215ENST00000526938 ELP1O95163 1332 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms