RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 DDIT3P35638 169 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 GTF2IP78347 998 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 CCDC173Q0VFZ6 552 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 ZKSCAN8Q15776 578 aaPredicted RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 APOBEC3FQ8IUX4 373 aaKnown RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 PANK1Q8TE04 598 aa13.29□□□□□ -0.28
VPS11-202ENST00000526829 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
VPS11-202ENST00000526829 ECM29Q5VYK3 1845 aa13.28□□□□□ -0.28
VPS11-202ENST00000526829 OFD1O75665 1012 aa13.28□□□□□ -0.28
VPS11-202ENST00000526829 MTMR14Q8NCE2 650 aa13.28□□□□□ -0.28
VPS11-202ENST00000526829 PPP1R9BQ96SB3 815 aa13.28□□□□□ -0.28
VPS11-202ENST00000526829 F6X3S4 739 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 RAD21O60216 631 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 TM4SF4P48230 202 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.28
VPS11-202ENST00000526829 HSCBQ8IWL3 235 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 CERS5Q8N5B7 392 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 TSPYL1Q9H0U9 437 aa13.27□□□□□ -0.28
VPS11-202ENST00000526829 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.28
VPS11-202ENST00000526829 SNAP23O00161 211 aa13.27□□□□□ -0.29
VPS11-202ENST00000526829 TAF5LO75529 589 aa13.27□□□□□ -0.29
VPS11-202ENST00000526829 IL1R1P14778 569 aa13.27□□□□□ -0.29
VPS11-202ENST00000526829 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
VPS11-202ENST00000526829 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.29
VPS11-202ENST00000526829 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
VPS11-202ENST00000526829 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
VPS11-202ENST00000526829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.27□□□□□ -0.297e-14■■■■■ 114.9
VPS11-202ENST00000526829 FKBP1AP62942 108 aaKnown RBP13.26□□□□□ -0.29
VPS11-202ENST00000526829 NOM1Q5C9Z4 860 aaKnown RBP13.26□□□□□ -0.29
VPS11-202ENST00000526829 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
VPS11-202ENST00000526829 SNX21Q969T3 373 aa13.26□□□□□ -0.29
VPS11-202ENST00000526829 GBP4Q96PP9 640 aa13.26□□□□□ -0.29
VPS11-202ENST00000526829 RBM28Q9NW13 759 aaKnown RBP13.26□□□□□ -0.29
VPS11-202ENST00000526829 PCDHB15Q9Y5E8 787 aa13.26□□□□□ -0.29
VPS11-202ENST00000526829 LAMB1P07942 1786 aa13.26□□□□□ -0.29
VPS11-202ENST00000526829 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
VPS11-202ENST00000526829 LMBR1LQ6UX01 489 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 ARMC9Q7Z3E5 817 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 ZNF804AQ7Z570 1209 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 ZSCAN30Q86W11 494 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 HELBQ8NG08 1087 aaPredicted RBP13.25□□□□□ -0.29
VPS11-202ENST00000526829 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 GRM8O00222 908 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 NRDCO43847 1150 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
VPS11-202ENST00000526829 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 CFHR5Q9BXR6 569 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 CEP83Q9Y592 693 aa13.25□□□□□ -0.29
VPS11-202ENST00000526829 SSC5DA1L4H1 1573 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
VPS11-202ENST00000526829 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 DEFB129Q9H1M3 183 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
VPS11-202ENST00000526829 TBC1D8O95759 1140 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 SPTY2D1Q68D10 685 aaPredicted RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 KCTD17Q8N5Z5 321 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 RNF217Q8TC41 542 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 ZNF296Q8WUU4 475 aaPredicted RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 CHMP4CQ96CF2 233 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 SRCIN1Q9C0H9 1055 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 MYO1BO43795 1136 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 RARSP54136 660 aaKnown RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 SPRYD7Q5W111 196 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
VPS11-202ENST00000526829 PCDHAC2Q9Y5I4 1007 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 FAM205AQ6ZU69 1335 aa13.23□□□□□ -0.29
VPS11-202ENST00000526829 ARAP2Q8WZ64 1704 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 SLC34A2O95436 690 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 PRKG1Q13976 671 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 SETDB1Q15047 1291 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 HS1BP3Q53T59 392 aa13.22□□□□□ -0.29
VPS11-202ENST00000526829 TNRC18O15417 2968 aaPredicted RBP13.22□□□□□ -0.29
VPS11-202ENST00000526829 UNCXA6NJT0 531 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 GPR25O00155 361 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
VPS11-202ENST00000526829 MTA1Q13330 715 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 RAB3GAP1Q15042 981 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
VPS11-202ENST00000526829 MKL1Q969V6 931 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
VPS11-202ENST00000526829 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms