RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 SUPT20HL1Q3ZLR7 823 aa27.41■■□□□ 1.98
CKLF-206ENST00000526149 PIH1D3Q9NQM4 214 aaKnown RBP27.41■■□□□ 1.98
CKLF-206ENST00000526149 USP40Q9NVE5 1235 aa27.41■■□□□ 1.98
CKLF-206ENST00000526149 RAI14Q9P0K7 980 aa27.41■■□□□ 1.98
CKLF-206ENST00000526149 NDUFB9Q9Y6M9 179 aa27.41■■□□□ 1.98
CKLF-206ENST00000526149 THSD7BQ9C0I4 1608 aa27.41■■□□□ 1.98
CKLF-206ENST00000526149 MROH7-TTC4A0A0A0MT08 1334 aa27.41■■□□□ 1.98
CKLF-206ENST00000526149 HSPA1AP0DMV8 641 aaKnown RBP27.4■■□□□ 1.98
CKLF-206ENST00000526149 HSPA1BP0DMV9 641 aaKnown RBP27.4■■□□□ 1.98
CKLF-206ENST00000526149 TNNI2P48788 182 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 ZNF157P51786 506 aaPredicted RBP27.4■■□□□ 1.98
CKLF-206ENST00000526149 NFIAQ12857 509 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 MAP3K11Q16584 847 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 LDLRAD1Q5T700 205 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 FAM83AQ86UY5 434 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 LRRCC1Q9C099 1032 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 TMOD2Q9NZR1 351 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 LRP2BPQ9P2M1 347 aa27.4■■□□□ 1.98
CKLF-206ENST00000526149 IFIT2P09913 472 aaKnown RBP27.39■■□□□ 1.98
CKLF-206ENST00000526149 ARMC9Q7Z3E5 817 aa27.39■■□□□ 1.98
CKLF-206ENST00000526149 SLF2Q8IX21 1173 aa27.39■■□□□ 1.98
CKLF-206ENST00000526149 BCL11AQ9H165 835 aa27.39■■□□□ 1.98
CKLF-206ENST00000526149 ANGEL1Q9UNK9 670 aaKnown RBP27.39■■□□□ 1.98
CKLF-206ENST00000526149 MYH2Q9UKX2 1941 aa27.39■■□□□ 1.97
CKLF-206ENST00000526149 GPR75-ASB3A0A0A6YYF3 556 aa27.38■■□□□ 1.97
CKLF-206ENST00000526149 USP2O75604 605 aaPredicted RBP27.38■■□□□ 1.97
CKLF-206ENST00000526149 SLC10A3P09131 477 aa27.38■■□□□ 1.97
CKLF-206ENST00000526149 MAP2K2P36507 400 aa27.38■■□□□ 1.97
CKLF-206ENST00000526149 BTDP43251 543 aa27.38■■□□□ 1.97
CKLF-206ENST00000526149 WBP1LQ9NX94 342 aa27.38■■□□□ 1.97
CKLF-206ENST00000526149 FAM198AQ9UFP1 575 aa27.38■■□□□ 1.97
CKLF-206ENST00000526149 RASAL3Q86YV0 1011 aa27.37■■□□□ 1.97
CKLF-206ENST00000526149 CCDC102AQ96A19 550 aa27.37■■□□□ 1.97
CKLF-206ENST00000526149 ANTXR1Q9H6X2 564 aa27.37■■□□□ 1.97
CKLF-206ENST00000526149 RHBDL3P58872 404 aa27.36■■□□□ 1.97
CKLF-206ENST00000526149 FAM151AQ8WW52 585 aa27.36■■□□□ 1.97
CKLF-206ENST00000526149 RFX7Q2KHR2 1363 aa27.35■■□□□ 1.97
CKLF-206ENST00000526149 PPP1R12BO60237 982 aaPredicted RBP27.35■■□□□ 1.97
CKLF-206ENST00000526149 LDHCP07864 332 aa27.35■■□□□ 1.97
CKLF-206ENST00000526149 GSTO1P78417 241 aa27.35■■□□□ 1.97
CKLF-206ENST00000526149 NOGQ13253 232 aa27.35■■□□□ 1.97
CKLF-206ENST00000526149 ZFPM1Q8IX07 1006 aa27.35■■□□□ 1.97
CKLF-206ENST00000526149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.35■■□□□ 1.97
CKLF-206ENST00000526149 IDI2Q9BXS1 227 aa27.35■■□□□ 1.97
CKLF-206ENST00000526149 WDHD1O75717 1129 aaPredicted RBP27.34■■□□□ 1.97
CKLF-206ENST00000526149 TCP10Q12799 353 aa27.34■■□□□ 1.97
CKLF-206ENST00000526149 EXOC6Q8TAG9 804 aa27.34■■□□□ 1.97
CKLF-206ENST00000526149 MAP2K1Q02750 393 aaPredicted RBP27.33■■□□□ 1.97
CKLF-206ENST00000526149 ADGRA1Q86SQ6 560 aa27.33■■□□□ 1.97
CKLF-206ENST00000526149 DDX4Q9NQI0 724 aaKnown RBP27.33■■□□□ 1.97
CKLF-206ENST00000526149 RPAP1Q9BWH6 1393 aaPredicted RBP27.33■■□□□ 1.97
CKLF-206ENST00000526149 MYO5AQ9Y4I1 1855 aaKnown RBP27.32■■□□□ 1.96
CKLF-206ENST00000526149 RGS3P49796 1198 aa27.32■■□□□ 1.96
CKLF-206ENST00000526149 KIF23Q02241 960 aaPredicted RBP27.32■■□□□ 1.96
CKLF-206ENST00000526149 NAA16Q6N069 864 aaPredicted RBP27.32■■□□□ 1.96
CKLF-206ENST00000526149 CLMNQ96JQ2 1002 aa27.32■■□□□ 1.96
CKLF-206ENST00000526149 FOXN1O15353 648 aa27.31■■□□□ 1.96
CKLF-206ENST00000526149 IGSF3O75054 1194 aa27.31■■□□□ 1.96
CKLF-206ENST00000526149 ATP5JP18859 108 aa27.31■■□□□ 1.96
CKLF-206ENST00000526149 ENTPD3O75355 529 aa27.3■■□□□ 1.96
CKLF-206ENST00000526149 IREB2P48200 963 aaKnown RBP27.3■■□□□ 1.96
CKLF-206ENST00000526149 HDAC1Q13547 482 aaPredicted RBP27.3■■□□□ 1.96
CKLF-206ENST00000526149 AAMPQ13685 434 aa27.3■■□□□ 1.96
CKLF-206ENST00000526149 SH3BP5LQ7L8J4 393 aa27.3■■□□□ 1.96
CKLF-206ENST00000526149 IDH1O75874 414 aaKnown RBP27.29■■□□□ 1.96
CKLF-206ENST00000526149 EDC3Q96F86 508 aaKnown RBP27.29■■□□□ 1.96
CKLF-206ENST00000526149 BOLA2Q9H3K6 86 aa27.29■■□□□ 1.96
CKLF-206ENST00000526149 MAST2Q6P0Q8 1798 aa27.29■■□□□ 1.96
CKLF-206ENST00000526149 UNCXA6NJT0 531 aa27.28■■□□□ 1.96
CKLF-206ENST00000526149 PPP4CP60510 307 aa27.28■■□□□ 1.96
CKLF-206ENST00000526149 SH3RF3Q8TEJ3 882 aaPredicted RBP27.28■■□□□ 1.96
CKLF-206ENST00000526149 DNAJC2Q99543 621 aaKnown RBP27.28■■□□□ 1.96
CKLF-206ENST00000526149 MAP4K4O95819 1239 aaPredicted RBP27.27■■□□□ 1.96
CKLF-206ENST00000526149 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.27■■□□□ 1.96
CKLF-206ENST00000526149 ANKRD13AQ8IZ07 590 aa27.27■■□□□ 1.96
CKLF-206ENST00000526149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.27■■□□□ 1.96
CKLF-206ENST00000526149 SLC10A4Q96EP9 437 aa27.27■■□□□ 1.96
CKLF-206ENST00000526149 CSRNP1Q96S65 589 aa27.27■■□□□ 1.96
CKLF-206ENST00000526149 AATFQ9NY61 560 aaKnown RBP eCLIP27.27■■□□□ 1.96
CKLF-206ENST00000526149 DOCK2Q92608 1830 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 GOLIM4O00461 696 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 CYP7A1P22680 504 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 PICALMQ13492 652 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 MIGA2Q7L4E1 593 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 MAGEB6Q8N7X4 407 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 HAUS7Q99871 368 aa27.26■■□□□ 1.95
CKLF-206ENST00000526149 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.26■■□□□ 1.95
CKLF-206ENST00000526149 ATRNL1Q5VV63 1379 aa27.25■■□□□ 1.95
CKLF-206ENST00000526149 DDTLA6NHG4 134 aaPredicted RBP27.25■■□□□ 1.95
CKLF-206ENST00000526149 NPM3O75607 178 aaKnown RBP27.25■■□□□ 1.95
CKLF-206ENST00000526149 MAP3K9P80192 1104 aa27.25■■□□□ 1.95
CKLF-206ENST00000526149 MKRN3Q13064 507 aaKnown RBP27.25■■□□□ 1.95
CKLF-206ENST00000526149 TTF1Q15361 905 aaPredicted RBP27.25■■□□□ 1.95
CKLF-206ENST00000526149 SPRYD7Q5W111 196 aa27.25■■□□□ 1.95
CKLF-206ENST00000526149 GJA5P36382 358 aa27.24■■□□□ 1.95
CKLF-206ENST00000526149 DYNLL1P63167 89 aaKnown RBP27.24■■□□□ 1.95
CKLF-206ENST00000526149 MAP3K12Q12852 859 aa27.24■■□□□ 1.95
CKLF-206ENST00000526149 TEX11Q8IYF3 940 aa27.24■■□□□ 1.95
CKLF-206ENST00000526149 AIDAQ96BJ3 306 aa27.24■■□□□ 1.95
CKLF-206ENST00000526149 HOOK2Q96ED9 719 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms