RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 MRPL50Q8N5N7 158 aaKnown RBP12□□□□□ -0.49
TRAPPC4-206ENST00000525303 HOOK2Q96ED9 719 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 MRIQ9BWK5 157 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 ARHGAP39Q9C0H5 1083 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 MAST3O60307 1309 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 RPAP1Q9BWH6 1393 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-206ENST00000525303 SZT2Q5T011 3432 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 DOCK1Q14185 1865 aa12□□□□□ -0.49
TRAPPC4-206ENST00000525303 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 LACTBP83111 547 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 PPIL2Q13356 520 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 KIF22Q14807 665 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 DCAF15Q66K64 600 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 HHIPL2Q6UWX4 724 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 ZCCHC17Q9NP64 241 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 SUGT1Q9Y2Z0 365 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
TRAPPC4-206ENST00000525303 PTPRCP08575 1304 aa11.98□□□□□ -0.49
TRAPPC4-206ENST00000525303 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
TRAPPC4-206ENST00000525303 FGFR2P21802 821 aa11.98□□□□□ -0.49
TRAPPC4-206ENST00000525303 INPP5BP32019 993 aa11.98□□□□□ -0.49
TRAPPC4-206ENST00000525303 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
TRAPPC4-206ENST00000525303 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
TRAPPC4-206ENST00000525303 SLC5A1P13866 664 aa11.97□□□□□ -0.49
TRAPPC4-206ENST00000525303 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRAPPC4-206ENST00000525303 PPATQ06203 517 aa11.97□□□□□ -0.49
TRAPPC4-206ENST00000525303 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-206ENST00000525303 WDR66Q8TBY9 1149 aa11.97□□□□□ -0.49
TRAPPC4-206ENST00000525303 EYA2O00167 538 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 GNRH1P01148 92 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 TCP10Q12799 353 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 C17orf99Q6UX52 265 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 FAM151AQ8WW52 585 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 SSH1Q8WYL5 1049 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 LPIN2Q92539 896 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 CPA4Q9UI42 421 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
TRAPPC4-206ENST00000525303 PDHXO00330 501 aa11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 CTGFP29279 349 aa11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 FXR1P51114 621 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 PRMT2P55345 433 aa11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 NFIAQ12857 509 aa11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 RANBP2P49792 3224 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-206ENST00000525303 ALPK3Q96L96 1907 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 ADGRA2Q96PE1 1338 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 PRDX5P30044 214 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 PSMC4P43686 418 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 MTFR1Q15390 333 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 ATG9AQ7Z3C6 839 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 TRIM47Q96LD4 638 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 SIL1Q9H173 461 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 SRRDQ9UH36 339 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 ZNF112Q9UJU3 913 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 KCNH4Q9UQ05 1017 aa11.94□□□□□ -0.5
TRAPPC4-206ENST00000525303 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 E9PSI1 815 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 H0YGN5 161 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 LDHBP07195 334 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 OSBPP22059 807 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 MOGSQ13724 837 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 ATP2B3Q16720 1220 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 RAET1EQ8TD07 263 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 SHISA4Q96DD7 197 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-206ENST00000525303 MYPNQ86TC9 1320 aa11.92□□□□□ -0.5
TRAPPC4-206ENST00000525303 HOXD10P28358 340 aa11.92□□□□□ -0.5
TRAPPC4-206ENST00000525303 NOL9Q5SY16 702 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-206ENST00000525303 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
TRAPPC4-206ENST00000525303 GNL3LQ9NVN8 582 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-206ENST00000525303 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
TRAPPC4-206ENST00000525303 SALL1Q9NSC2 1324 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 CIAO1O76071 339 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 CYP2C8P10632 490 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 GRK4P32298 578 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 PHKA1P46020 1223 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 GPAT2Q6NUI2 795 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 ATRNL1Q5VV63 1379 aa11.91□□□□□ -0.5
TRAPPC4-206ENST00000525303 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms