RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MYH2Q9UKX2 1941 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 APBB1O00213 710 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 ZBTB22O15209 634 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 TRPA1O75762 1119 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 UQCRFS1P1P0C7P4 283 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 IREB2P48200 963 aaKnown RBP15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 TCP10Q12799 353 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 PDE3AQ14432 1141 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 SPTY2D1Q68D10 685 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 ERICH6Q7L0X2 663 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 SIRT2Q8IXJ6 389 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 RPAP2Q8IXW5 612 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 EAF2Q96CJ1 260 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 RNF186Q9NXI6 227 aa15.79■□□□□ 0.12
TRAPPC4-205ENST00000525079 CA12O43570 354 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 MECOMQ03112 1051 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 NFIAQ12857 509 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 SPRYD7Q5W111 196 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 FAM83AQ86UY5 434 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 IL1RAPL2Q9NP60 686 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 RAI14Q9P0K7 980 aa15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
TRAPPC4-205ENST00000525079 FKBP1CQ5VVH2 108 aa15.77■□□□□ 0.12
TRAPPC4-205ENST00000525079 ERC1Q8IUD2 1116 aa15.77■□□□□ 0.12
TRAPPC4-205ENST00000525079 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
TRAPPC4-205ENST00000525079 ZNF384Q8TF68 577 aa15.77■□□□□ 0.12
TRAPPC4-205ENST00000525079 FAM151AQ8WW52 585 aa15.77■□□□□ 0.12
TRAPPC4-205ENST00000525079 CHMP4BQ9H444 224 aaKnown RBP15.77■□□□□ 0.12
TRAPPC4-205ENST00000525079 AKAP11Q9UKA4 1901 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 GAKO14976 1311 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 HMMRO75330 724 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 BTDP43251 543 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 MIGA2Q7L4E1 593 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 AACSQ86V21 672 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZFPM1Q8IX07 1006 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 SLF2Q8IX21 1173 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 RHPN1Q8TCX5 695 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 WNK4Q96J92 1243 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 LRP2BPQ9P2M1 347 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 FAM198AQ9UFP1 575 aa15.76■□□□□ 0.11
TRAPPC4-205ENST00000525079 MROH7-TTC4A0A0A0MT08 1334 aa15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 OTOFQ9HC10 1997 aa15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 GJA5P36382 358 aa15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZAP70P43403 619 aa15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 HSP90AB4PQ58FF6 505 aa15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 NSUN4Q96CB9 384 aaKnown RBP15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 FAM163AQ96GL9 167 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC4-205ENST00000525079 AK9Q5TCS8 1911 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 CAPN15O75808 1086 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 CYP2E1P05181 493 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 TM4SF4P48230 202 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 RGS3P49796 1198 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 MAP3K9P80192 1104 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 SAGE1Q9NXZ1 904 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 NDUFB9Q9Y6M9 179 aa15.74■□□□□ 0.11
TRAPPC4-205ENST00000525079 CASP8AP2Q9UKL3 1982 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 GPR75-ASB3A0A0A6YYF3 556 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 TBC1D8O95759 1140 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 LDHCP07864 332 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 GSTO1P78417 241 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 PICALMQ13492 652 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 VGLL4Q14135 290 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 OPTNQ96CV9 577 aa15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZNF512BQ96KM6 892 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 PIH1D3Q9NQM4 214 aaKnown RBP15.73■□□□□ 0.11
TRAPPC4-205ENST00000525079 MYO5AQ9Y4I1 1855 aaKnown RBP15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 SREBF2Q12772 1141 aa15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 HOOK2Q96ED9 719 aa15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 KIF1BPQ96EK5 621 aa15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 WRNIP1Q96S55 665 aa15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 IDI2Q9BXS1 227 aa15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 DDX4Q9NQI0 724 aaKnown RBP15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 CSADQ9Y600 493 aa15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 RPAP1Q9BWH6 1393 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC4-205ENST00000525079 MANSC4A6NHS7 340 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 SLURP2P0DP57 97 aa15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZBTB48P10074 688 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 RHBDL3P58872 404 aa15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 DCAF15Q66K64 600 aa15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 NAA16Q6N069 864 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 SH3BP5LQ7L8J4 393 aa15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZSCAN29Q8IWY8 852 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 CLASRPQ8N2M8 674 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 ZNF341Q9BYN7 854 aa15.71■□□□□ 0.11
TRAPPC4-205ENST00000525079 DDTLA6NHG4 134 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 ENTPD3O75355 529 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 IFIT2P09913 472 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms