RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PDS5AQ29RF7 1337 aaKnown RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 TTC41PQ6P2S7 1318 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 TCRBV5S4A2TA0A5A2 114 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 FAM196BA6NMK8 535 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 SMIM22K7EJ46 135 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 ERC2O15083 957 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 PRKAB2O43741 272 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 MYO1BO43795 1136 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 GLRX3O76003 335 aaKnown RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 GSPT1P15170 499 aaKnown RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 RHBDL3P58872 404 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 C1QTNF8P60827 252 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 MAP3K12Q12852 859 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 RASA3Q14644 834 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 SPDYE2Q495Y8 402 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 NBPF12Q5TAG4 269 aaPredicted RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 CST9Q5W186 159 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 HHIPL2Q6UWX4 724 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 CCDC129Q6ZRS4 1044 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 CENPQQ7L2Z9 268 aaPredicted RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 MAPKAPK5Q8IW41 473 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 SULF1Q8IWU6 871 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 STK11IPQ8N1F8 1099 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 LCORLQ8N3X6 602 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 ZGPATQ8N5A5 531 aaKnown RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 RBM46Q8TBY0 533 aaKnown RBP5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 TGFBRAP1Q8WUH2 860 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 CDCA5Q96FF9 252 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 ZDHHC15Q96MV8 337 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 FSD1Q9BTV5 496 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 FAM198AQ9UFP1 575 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 STAP2Q9UGK3 403 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 PGAP2Q9UHJ9 254 aa5.58□□□□□ -1.52
CHMP4A-202ENST00000524955 CNTNAP1P78357 1384 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 GAKO14976 1311 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 GPR75-ASB3A0A0A6YYF3 556 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 MAGEB6P1A0A0J9YX57 407 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 DDTLA6NHG4 134 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 UBE2Q2LH0YL09 131 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 M0R2C6 588 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 WDHD1O75717 1129 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 MBD4O95243 580 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 CELF2O95319 508 aaKnown RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 LDHCP07864 332 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 ADD2P35612 726 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 GSTO1P78417 241 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 HDLBPQ00341 1268 aaKnown RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 TTLL12Q14166 644 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 TTF1Q15361 905 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 PAXIP1Q6ZW49 1069 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 CDC37L1Q7L3B6 337 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 SH3BP5LQ7L8J4 393 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 ZSCAN29Q8IWY8 852 aaPredicted RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 TEX11Q8IYF3 940 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 KBTBD3Q8NAB2 608 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 MTMR14Q8NCE2 650 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 SDR42E1Q8WUS8 393 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 OSBP2Q969R2 916 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 FAM227BQ96M60 508 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 NOL10Q9BSC4 688 aaKnown RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 PUS7LQ9H0K6 701 aaKnown RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 DEFB129Q9H1M3 183 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 TMOD2Q9NZR1 351 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 MKRN1Q9UHC7 482 aaKnown RBP5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 SUGT1Q9Y2Z0 365 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 GTF3C3Q9Y5Q9 886 aa5.57□□□□□ -1.52
CHMP4A-202ENST00000524955 PASKQ96RG2 1323 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 CYP2D7A0A087X1C5 515 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 A0A0D9SFI3 127 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 RNF113AO15541 343 aaKnown RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 CYP2D6P10635 497 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 SDSP20132 328 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 USP5P45974 858 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 FSTL1Q12841 308 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 MKRN3Q13064 507 aaKnown RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 NMIQ13287 307 aaPredicted RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 SHROOM1Q2M3G4 852 aaPredicted RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 TTC22Q5TAA0 569 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 APOBEC3FQ8IUX4 373 aaKnown RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 SLF2Q8IX21 1173 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 ZC3H15Q8WU90 426 aaKnown RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 EVI5LQ96CN4 794 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 TEPSINQ96N21 525 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 RIOK1Q9BRS2 568 aaKnown RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 IL25Q9H293 177 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 PALD1Q9ULE6 856 aa5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 ABT1Q9ULW3 272 aaKnown RBP5.56□□□□□ -1.52
CHMP4A-202ENST00000524955 FLT1P17948 1338 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 PITPNM2Q9BZ72 1349 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 TMEM88BA6NKF7 163 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 BAG3O95817 575 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 APPP05067 770 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 APLP1P51693 650 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 VPS53Q5VIR6 699 aa5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 CWC27Q6UX04 472 aaKnown RBP5.55□□□□□ -1.52
CHMP4A-202ENST00000524955 ZNF589Q86UQ0 364 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms