RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SREBF2Q12772 1141 aa13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 OS9Q13438 667 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 CEP85Q6P2H3 762 aa13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
TRAPPC4-204ENST00000524797 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 SPTY2D1Q68D10 685 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 FPGT-TNNI3KV9GXZ4 949 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 GAKO14976 1311 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 GJA5P36382 358 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 ELP3Q9H9T3 547 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 USP40Q9NVE5 1235 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
TRAPPC4-204ENST00000524797 MANSC4A6NHS7 340 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-204ENST00000524797 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
TRAPPC4-204ENST00000524797 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
TRAPPC4-204ENST00000524797 SPATA5Q8NB90 893 aa13.75□□□□□ -0.21
TRAPPC4-204ENST00000524797 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRAPPC4-204ENST00000524797 FAM151AQ8WW52 585 aa13.75□□□□□ -0.21
TRAPPC4-204ENST00000524797 MCAMP43121 646 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 DBNDD2Q9BQY9 259 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 COG6Q9Y2V7 657 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 RFX7Q2KHR2 1363 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 NFIAQ12857 509 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 CDK5RAP2Q96SN8 1893 aa13.74□□□□□ -0.21
TRAPPC4-204ENST00000524797 MROH7-TTC4A0A0A0MT08 1334 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 MECOMQ03112 1051 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 TCP10Q12799 353 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 VGLL4Q14135 290 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 TTC39AQ5SRH9 613 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 ZNF384Q8TF68 577 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 OPTNQ96CV9 577 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
TRAPPC4-204ENST00000524797 INHBEP58166 350 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 DGKZQ13574 1117 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 MCOLN1Q9GZU1 580 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 CSADQ9Y600 493 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 BTDP43251 543 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 CCDC158Q5M9N0 1113 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 IDI2Q9BXS1 227 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 ZBTB40Q9NUA8 1239 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 SNCAIPQ9Y6H5 919 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
TRAPPC4-204ENST00000524797 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 ENTPD3O75355 529 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 RGS3P49796 1198 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 GSTO1P78417 241 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 NSUN4Q96CB9 384 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 WRNIP1Q96S55 665 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 DBNLQ9UJU6 430 aaKnown RBP13.71□□□□□ -0.21
TRAPPC4-204ENST00000524797 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 ALDH1A1P00352 501 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 LDHCP07864 332 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 R3HDMLQ9H3Y0 253 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 TLR7Q9NYK1 1049 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 RAI14Q9P0K7 980 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 DOCK1Q14185 1865 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 SPDYE5A6NIY4 337 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 GPR25O00155 361 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 RHBDL3P58872 404 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 RPAP2Q8IXW5 612 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 ZNF112Q9UJU3 913 aa13.7□□□□□ -0.22
TRAPPC4-204ENST00000524797 PDE3AQ14432 1141 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 C20orf194Q5TEA3 1177 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 SIRT2Q8IXJ6 389 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 ZNF296Q8WUU4 475 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms