RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 BDP1A6H8Y1 2624 aa10.6□□□□□ -0.71
PUM1-213ENST00000524516 BMP1P13497 986 aa10.6□□□□□ -0.71
PUM1-213ENST00000524516 BADQ92934 168 aa10.6□□□□□ -0.71
PUM1-213ENST00000524516 SENP6Q9GZR1 1112 aaPredicted RBP10.6□□□□□ -0.71
PUM1-213ENST00000524516 TDRD3Q9H7E2 651 aaKnown RBP10.6□□□□□ -0.71
PUM1-213ENST00000524516 CXXC1Q9P0U4 656 aaPredicted RBP10.6□□□□□ -0.71
PUM1-213ENST00000524516 KCNQ1P51787 676 aa10.59□□□□□ -0.71
PUM1-213ENST00000524516 ATN1P54259 1190 aaPredicted RBP10.59□□□□□ -0.71
PUM1-213ENST00000524516 TFF2Q03403 129 aa10.59□□□□□ -0.71
PUM1-213ENST00000524516 TIFAQ96CG3 184 aa10.59□□□□□ -0.71
PUM1-213ENST00000524516 CDC5LQ99459 802 aaKnown RBP10.59□□□□□ -0.71
PUM1-213ENST00000524516 PRDM12Q9H4Q4 367 aa10.59□□□□□ -0.71
PUM1-213ENST00000524516 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
PUM1-213ENST00000524516 KLRK1P26718 216 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 KCNJ4P48050 445 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 RTP1P59025 263 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 HOOK2Q96ED9 719 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 ISCA1Q9BUE6 129 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 MINPP1Q9UNW1 487 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 ATP11BQ9Y2G3 1177 aa10.58□□□□□ -0.72
PUM1-213ENST00000524516 PRR33A8MZF0 331 aa10.57□□□□□ -0.72
PUM1-213ENST00000524516 ST18O60284 1047 aa10.57□□□□□ -0.72
PUM1-213ENST00000524516 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
PUM1-213ENST00000524516 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
PUM1-213ENST00000524516 MICALL1Q8N3F8 863 aa10.57□□□□□ -0.72
PUM1-213ENST00000524516 PLBD2Q8NHP8 589 aa10.57□□□□□ -0.72
PUM1-213ENST00000524516 LEMD3Q9Y2U8 911 aa10.57□□□□□ -0.72
PUM1-213ENST00000524516 NCOR1O75376 2440 aa10.57□□□□□ -0.72
PUM1-213ENST00000524516 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.56□□□□□ -0.72
PUM1-213ENST00000524516 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.56□□□□□ -0.72
PUM1-213ENST00000524516 INPP5BP32019 993 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 MOGSQ13724 837 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 TRIB2Q92519 343 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 FBXL18Q96ME1 805 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 JAG2Q9Y219 1238 aa10.56□□□□□ -0.72
PUM1-213ENST00000524516 PDE8AO60658 829 aa10.55□□□□□ -0.72
PUM1-213ENST00000524516 CSPP1Q1MSJ5 1256 aa10.55□□□□□ -0.72
PUM1-213ENST00000524516 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
PUM1-213ENST00000524516 FASTKD5Q7L8L6 764 aaKnown RBP10.55□□□□□ -0.72
PUM1-213ENST00000524516 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.723e-7■■■■□ 24.2
PUM1-213ENST00000524516 ZNF341Q9BYN7 854 aa10.55□□□□□ -0.72
PUM1-213ENST00000524516 BSDC1Q9NW68 430 aaPredicted RBP10.55□□□□□ -0.72
PUM1-213ENST00000524516 CCDC129Q6ZRS4 1044 aa10.54□□□□□ -0.72
PUM1-213ENST00000524516 DZIP1LQ8IYY4 767 aaKnown RBP10.54□□□□□ -0.72
PUM1-213ENST00000524516 TSPYL4Q9UJ04 414 aa10.54□□□□□ -0.72
PUM1-213ENST00000524516 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
PUM1-213ENST00000524516 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 CYP2B6P20813 491 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 FKBP1AP62942 108 aaKnown RBP10.53□□□□□ -0.72
PUM1-213ENST00000524516 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 FAM110CQ1W6H9 321 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 MAP3K21Q5TCX8 1036 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 KCNH6Q9H252 994 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 TMOD2Q9NZR1 351 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 SERPINA10Q9UK55 444 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 TTF2Q9UNY4 1162 aaKnown RBP10.53□□□□□ -0.72
PUM1-213ENST00000524516 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
PUM1-213ENST00000524516 AK9Q5TCS8 1911 aa10.52□□□□□ -0.72
PUM1-213ENST00000524516 FRMPD3Q5JV73 1810 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 PI4K2BG5E9Z4 385 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 CXCL11O14625 94 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 NEFMP07197 916 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 ZKSCAN1P17029 563 aaPredicted RBP10.52□□□□□ -0.73
PUM1-213ENST00000524516 CCND3P30281 292 aaPredicted RBP10.52□□□□□ -0.73
PUM1-213ENST00000524516 CACNB3P54284 484 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 CNGB1Q14028 1251 aaPredicted RBP10.52□□□□□ -0.73
PUM1-213ENST00000524516 LHX8Q68G74 356 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 ZNF804AQ7Z570 1209 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 JARID2Q92833 1246 aaPredicted RBP10.52□□□□□ -0.73
PUM1-213ENST00000524516 CFAP53Q96M91 514 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 ANKRD2Q9GZV1 360 aa10.52□□□□□ -0.73
PUM1-213ENST00000524516 DOCK3Q8IZD9 2030 aa10.51□□□□□ -0.73
PUM1-213ENST00000524516 IGHMBP2P38935 993 aaKnown RBP10.51□□□□□ -0.73
PUM1-213ENST00000524516 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
PUM1-213ENST00000524516 PDLIM7Q9NR12 457 aa10.51□□□□□ -0.73
PUM1-213ENST00000524516 CHPF2Q9P2E5 772 aa10.51□□□□□ -0.73
PUM1-213ENST00000524516 SLC45A1Q9Y2W3 748 aa10.51□□□□□ -0.73
PUM1-213ENST00000524516 A0A0G2JLL6 359 aaPredicted RBP10.5□□□□□ -0.73
PUM1-213ENST00000524516 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
PUM1-213ENST00000524516 CTSWP56202 376 aa10.5□□□□□ -0.73
PUM1-213ENST00000524516 TRIM28Q13263 835 aaKnown RBP10.5□□□□□ -0.73
PUM1-213ENST00000524516 PRRT2Q7Z6L0 340 aaPredicted RBP10.5□□□□□ -0.73
PUM1-213ENST00000524516 GJD2Q9UKL4 321 aa10.5□□□□□ -0.73
PUM1-213ENST00000524516 DLG5Q8TDM6 1919 aa10.5□□□□□ -0.73
PUM1-213ENST00000524516 RPAP1Q9BWH6 1393 aaPredicted RBP10.5□□□□□ -0.73
PUM1-213ENST00000524516 DNM1LO00429 736 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 ERC2O15083 957 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 PBX2P40425 430 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 CRKP46108 304 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 EPHB4P54760 987 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 TRIM60Q495X7 471 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 MFSD14BQ5SR56 506 aa10.49□□□□□ -0.73
PUM1-213ENST00000524516 SH3RF1Q7Z6J0 888 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms