RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 VGLL2Q8N8G2 317 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 ZNF516Q92618 1163 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 TATDN2Q93075 761 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 ZNF775Q96BV0 537 aaPredicted RBP9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 LNPKQ9C0E8 428 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 FER1L6Q2WGJ9 1857 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 CCDC88AQ3V6T2 1871 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 TTC41PQ6P2S7 1318 aa9.8□□□□□ -0.84
NECTIN1-204ENST00000524429 MYO5AQ9Y4I1 1855 aaKnown RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 SRGNP10124 158 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 NPR1P16066 1061 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 RPS8P62241 208 aaKnown RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 GRAPQ13588 217 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 GRAPLQ8TC17 118 aaPredicted RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 RPGRQ92834 1020 aaKnown RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 RBM17Q96I25 401 aaKnown RBP9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 MPHOSPH8Q99549 860 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 SIL1Q9H173 461 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 SEC31BQ9NQW1 1179 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 USTQ9Y2C2 406 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 AKAP2Q9Y2D5 859 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 DUOX1Q9NRD9 1551 aa9.79□□□□□ -0.84
NECTIN1-204ENST00000524429 BBOX1O75936 387 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 PDE8BO95263 885 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 MX1P20591 662 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 TFCP2Q12800 502 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 LRRC24Q50LG9 513 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 TNNI3KQ59H18 835 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 STYK1Q6J9G0 422 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 METTL3Q86U44 580 aaKnown RBP9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 GLMNQ92990 594 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 ZNF594Q96JF6 807 aaPredicted RBP9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 CNNM1Q9NRU3 951 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 FPGT-TNNI3KV9GXZ4 949 aa9.78□□□□□ -0.84
NECTIN1-204ENST00000524429 ZNF646O15015 1829 aaPredicted RBP9.77□□□□□ -0.84
NECTIN1-204ENST00000524429 HSPA1AP0DMV8 641 aaKnown RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 HSPA1BP0DMV9 641 aaKnown RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 ALDH1B1P30837 517 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 GGCXP38435 758 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 ABL2P42684 1182 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 PDE1AP54750 535 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 BMP2KLQ5H9B9 411 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 C16orf71Q8IYS4 520 aaPredicted RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 EAF2Q96CJ1 260 aaPredicted RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 MASTLQ96GX5 879 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 GPATCH3Q96I76 525 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 CCDC85AQ96PX6 553 aaPredicted RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 PUS3Q9BZE2 481 aaKnown RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 ANKRD2Q9GZV1 360 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 IL1RAPL2Q9NP60 686 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 FAM198AQ9UFP1 575 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 MAST2Q6P0Q8 1798 aa9.77□□□□□ -0.85
NECTIN1-204ENST00000524429 DICER1Q9UPY3 1922 aaKnown RBP9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 SNED1Q8TER0 1413 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 H0YIN7 160 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 SMARCA5O60264 1052 aaPredicted RBP9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 IFIT2P09913 472 aaKnown RBP9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 FGFR2P21802 821 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 SLC4A3P48751 1232 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 FSTL1Q12841 308 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 METTL24Q5JXM2 366 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 AACSQ86V21 672 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 CCDC24Q8N4L8 307 aa9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 ZNF512BQ96KM6 892 aaPredicted RBP9.76□□□□□ -0.85
NECTIN1-204ENST00000524429 A0A1B0GUL7 405 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 ERC2O15083 957 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 GLRX3O76003 335 aaKnown RBP9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 RGS3P49796 1198 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 TGFB2P61812 414 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 CHRNDQ07001 517 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 UBE4AQ14139 1066 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 ATP2B3Q16720 1220 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 TUSC1Q2TAM9 212 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 MTMR14Q8NCE2 650 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 PI4K2BQ8TCG2 481 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 LPIN2Q92539 896 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 CNKSR1Q969H4 720 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 ECHDC1Q9NTX5 307 aa9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 DBNLQ9UJU6 430 aaKnown RBP9.75□□□□□ -0.85
NECTIN1-204ENST00000524429 MINPP1Q9UNW1 487 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms